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Name : J113_25180 (J113_25180) Accession : YP_007963499.1 Strain : Mycobacterium tuberculosis CAS/NITR204 Genome accession: NC_021193 Putative virulence/resistance : Virulence Product : ATP-dependent protease ATP-binding subunit clpC1 Function : - COG functional category : - COG ID : - EC number : - Position : 4020492 - 4022528 bp Length : 2037 bp Strand : - Note : COG0542 ATPases with chaperone activity, ATP-binding subunit DNA sequence : GTGTCGACCAGTTCGGCCCAACCTCCGGCGGCGGCGATGGAAGGCAAACTGGACCCGGTCATCGGCCGCGAGAAGGAAAT CGAGCGGGTCATGCAGGTGCTCTCTCGGCGCACCAAGAACAACCCGGTGCTGATCGGCGAGCCCGGCGTCGGCAAGACCG CGGTCGTCGAAGGACTGGCGCAGGCCATCGTGCACGGCGAGGTGCCCGAGACGCTCAAGGACAAGCAGCTCTACACGCTG GATCTGGGATCGCTGGTGGCGGGTAGCCGCTACCGCGGTGACTTCGAGGAACGCCTCAAGAAGGTGCTCAAGGAGATCAA CACCCGCGGTGACATCATCCTGTTTATCGACGAGCTGCACACCTTGGTCGGTGCTGGAGCCGCCGAGGGCGCGATCGACG CCGCCTCGATCCTGAAACCGAAGCTCGCTCGCGGTGAACTGCAAACGATCGGCGCCACCACGCTCGACGAATACCGCAAG TACATCGAGAAGGACGCCGCGCTGGAGCGCCGCTTCCAGCCGGTGCAGGTGGGTGAGCCGACGGTGGAGCACACCATCGA GATCCTCAAGGGCCTGCGGGACCGGTACGAGGCGCACCACCGGGTGTCGATCACCGATGCGGCGATGGTGGCCGCCGCGA CCCTGGCCGACCGCTACATCAACGACCGGTTCCTGCCCGACAAGGCGATCGACCTGATCGACGAGGCGGGTGCTCGGATG CGGATTCGTCGCATGACCGCACCGCCAGACCTACGCGAGTTCGATGAGAAGATCGCCGAGGCTCGTCGGGAGAAGGAATC GGCTATCGACGCCCAGGACTTCGAGAAGGCCGCCAGCCTGCGCGACCGGGAGAAGACACTGGTCGCACAGCGTGCTGAGC GCGAAAAGCAGTGGCGTTCAGGCGATCTTGACGTGGTCGCGGAGGTCGACGACGAGCAGATCGCCGAGGTGCTGGGCAAC TGGACCGGTATCCCGGTGTTCAAGCTCACCGAGGCCGAGACCACCCGGCTGTTGCGGATGGAAGAAGAGCTGCACAAGCG GATCATCGGGCAAGAGGACGCCGTCAAGGCCGTTTCCAAGGCCATCCGGCGTACCCGGGCCGGGCTGAAAGACCCCAAGC GCCCGTCGGGCTCGTTCATCTTCGCCGGCCCGTCCGGTGTCGGTAAGACCGAACTGTCCAAGGCGCTGGCCAACTTCTTG TTCGGTGACGACGACGCGCTTATTCAGATTGACATGGGTGAATTCCACGACCGGTTCACCGCGTCGCGGCTATTCGGCGC GCCGCCCGGATACGTCGGCTACGAGGAGGGCGGCCAACTCACCGAGAAGGTGCGGCGCAAGCCGTTCTCGGTGGTGCTGT TCGACGAGATCGAGAAGGCGCATCAGGAGATCTACAACAGCCTGCTGCAGGTGCTCGAGGATGGCCGGCTCACCGACGGG CAGGGCCGCACGGTGGACTTCAAGAACACCGTGCTGATCTTTACGTCCAATCTGGGCACCTCCGACATCTCTAAGCCGGT CGGTCTGGGCTTTTCCAAGGGCGGCGGTGAGAACGACTACGAGCGGATGAAACAGAAGGTCAACGACGAGCTGAAGAAAC ACTTCCGCCCGGAGTTCCTCAACCGCATCGACGACATCATCGTCTTCCACCAGCTGACCCGCGAGGAGATCATCCGGATG GTCGACCTGATGATCAGCCGGGTCGCCGGCCAGCTCAAGAGCAAGGACATGGCGCTGGTGCTGACCGATGCGGCCAAGGC GCTGCTGGCCAAGCGTGGCTTCGACCCGGTGTTGGGGGCCCGCCCGTTGCGGCGCACCATCCAGCGTGAGATCGAAGATC AGCTCTCGGAGAAGATCCTCTTCGAGGAGGTCGGGCCGGGTCAGGTGGTCACCGTGCACGTGGACAACTGGGATCGTGAA GGTCCCGGCGAGGACGCGGTGTTCACCTTCACCGGTACCCGCAAGCCGCCGGCCGAGCCGGATCTGGCCAAGGCCTATGC CATCCGCGCGGGCGGCCCGGAGCCGGCCGCGCGGTAG Protein sequence : MSTSSAQPPAAAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPETLKDKQLYTL DLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQTIGATTLDEYRK YIEKDAALERRFQPVQVGEPTVEHTIEILKGLRDRYEAHHRVSITDAAMVAAATLADRYINDRFLPDKAIDLIDEAGARM RIRRMTAPPDLREFDEKIAEARREKESAIDAQDFEKAASLRDREKTLVAQRAEREKQWRSGDLDVVAEVDDEQIAEVLGN WTGIPVFKLTEAETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELSKALANFL FGDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDG QGRTVDFKNTVLIFTSNLGTSDISKPVGLGFSKGGGENDYERMKQKVNDELKKHFRPEFLNRIDDIIVFHQLTREEIIRM VDLMISRVAGQLKSKDMALVLTDAAKALLAKRGFDPVLGARPLRRTIQREIEDQLSEKILFEEVGPGQVVTVHVDNWDRE GPGEDAVFTFTGTRKPPAEPDLAKAYAIRAGGPEPAAR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 83 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| J113_25180 | YP_007963499.1 | ATP-dependent protease ATP-binding subunit clpC1 | VFG0079 | Protein | 0.0 | 61 |
| J113_25180 | YP_007963499.1 | ATP-dependent protease ATP-binding subunit clpC1 | VFG0080 | Protein | 2e-136 | 50 |
