Gene Information

Name : J113_20715 (J113_20715)
Accession : YP_007962839.1
Strain : Mycobacterium tuberculosis CAS/NITR204
Genome accession: NC_021193
Putative virulence/resistance : Resistance
Product : ATP-dependent DNA helicase RecG
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3316489 - 3318564 bp
Length : 2076 bp
Strand : -
Note : COG1200 RecG-like helicase

DNA sequence :
GTGGGTATCGGTGACGCGCGACCGGAAGCTGGCGAGCACATCACCATCGTCGACGTGATCACCGATACGTATTCGTTTCC
GATGAAAAAGAAGCCGAATCGGAAATGTCTGCGCATCACCGTCGGCGGCGGCCGCAACAAGGTGACGGCCACGTTCTTCA
ACGCGGACTACATCATGCGGGACCTCACCAAGCACACGAAGGTGATGCTCTCCGGGGAAGTCGGCTACTACAAGGGCGCG
ATGCAGCTCACGCATCCGGCGTTTCTCATCCTCGACTCGCCGGACGGGAAGAACCACGGCACCAGGTCGCTCAAAAGTAT
CGCTGATGCCTCCAAGGCCATCAGCGGTGAATTGGTCGTGGAGGAGTTCGAGCGTCGTTTCTTCCCGATCTATCCGGCCA
GCACAAAAGTGCAGAGCTGGGACATCTTCAAATGCGTGCGGCAGGTGCTCGATGTTCTCGACCGGGTCGATGATCCGTTG
CCCGCGGAACTACGCGCCAAGCACGGCCTGATCCCCGAGGACGAGGCACTGCGCGCCATTCACCTTGCCGAAAGCCAGTC
GTTACGCGAGCGCGCCCGGGAACGCCTGACCTTCGACGAGGCCGTGGGTCTGCAGTGGGCGCTGGTGGCCCGACGGCACG
GTGAACTGTCGGAATCCGGGCCCTCGGCGGCCTGGAAATCTAACGGTCTTGCCGCTGAGCTACTGCGGCGGTTGCCTTTT
GAGCTGACGGCGGGACAGCGTGAGGTGCTCGACGTGTTGTCCGACGGGCTCGCGGCGAACCGCCCGCTGAATCGCCTGCT
GCAAGGCGAAGTGGGCTCGGGCAAAACGATCGTTGCGGTGTTGGCGATGCTGCAGATGGTGGACGCGGGTTACCAGTGTG
CCCTGCTGGCGCCAACGGAAGTCCTTGCCGCACAACACTTGCGATCGATCCGCGATGTCCTAGGGCCGCTGGCCATGGGC
GGCCAACTGGGAGGCGCCGAAAACGCCACCCGGGTGGCACTGCTCACCGGTTCGATGACGGCAGGGCAGAAGAAGCAAGT
TCGCGCCGAAATCGCCAGCGGTCAGGTCGGCATCGTCATCGGCACGCACGCGCTGCTGCAGGAGGCCGTCGACTTTCACA
ACCTGGGCATGGTGGTGGTCGACGAGCAACACCGGTTTGGTGTCGAGCAGCGAGATCAGTTGCGCGCCAAGGCCCCCGCC
GGCATTACCCCGCACCTGCTGGTGATGACCGCGACGCCGATACCGCGCACGGTCGCGCTGACCGTCTATGGCGACCTGGA
AACCTCTACGCTGCGCGAACTTCCGCTCGGGCGCCAGCCGATTGCCACCAACGTCATCTTTGTCAAGGACAAGCCCGCCT
GGCTCGACCGCGCCTGGCGGCGCATCATCGAAGAGGCTGCCGCCGGCCGCCAGGCCTATGTGGTGGCGCCCCGCATCGAT
GAGTCCGACGACACCGACGTTCAAGGCGGCGTCCGACCATCGGCCACTGCCGAAGGCCTGTTCTCCCGGTTGCGTTCCGC
CGAGCTCGCAGAGTTGCGGTTGGCGCTCATGCATGGACGGTTGTCGGCCGACGACAAGGACGCTGCGATGGCGGCTTTCC
GGGCCGGTGAGGTCGATGTGCTGGTGTGCACCACGGTCATTGAGGTTGGCGTCGATGTCCCCAACGCTACGGTCATGCTG
GTGATGGACGCCGACCGGTTCGGCATCAGCCAATTGCACCAGCTGCGCGGCCGCATCGGGCGCGGCGAACATCCCAGCGT
GTGTCTGCTGGCCAGCTGGGTGCCGCCGGATACGCCGGCGGGTCAGCGGCTGCGTGCGGTCGCCGGGACAATGGACGGGT
TCGCCCTCGCCGATCTGGATCTGAAGGAGCGCAAGGAGGGAGATGTGCTGGGCCGCAACCAATCCGGCAAGGCCATCACG
CTGCGGTTGCTGTCATTGGCCGAACACGAGGAATACATAGTGGCCGCGCGGGACTTCTGCATCGAGGCTTACAAGAACCC
CACAGACCCCGCATTGGCGCTGATGGCCGCGCGATTCACCAGCACCGACCGCATCGAATACTTAGATAAGTCATGA

Protein sequence :
MGIGDARPEAGEHITIVDVITDTYSFPMKKKPNRKCLRITVGGGRNKVTATFFNADYIMRDLTKHTKVMLSGEVGYYKGA
MQLTHPAFLILDSPDGKNHGTRSLKSIADASKAISGELVVEEFERRFFPIYPASTKVQSWDIFKCVRQVLDVLDRVDDPL
PAELRAKHGLIPEDEALRAIHLAESQSLRERARERLTFDEAVGLQWALVARRHGELSESGPSAAWKSNGLAAELLRRLPF
ELTAGQREVLDVLSDGLAANRPLNRLLQGEVGSGKTIVAVLAMLQMVDAGYQCALLAPTEVLAAQHLRSIRDVLGPLAMG
GQLGGAENATRVALLTGSMTAGQKKQVRAEIASGQVGIVIGTHALLQEAVDFHNLGMVVVDEQHRFGVEQRDQLRAKAPA
GITPHLLVMTATPIPRTVALTVYGDLETSTLRELPLGRQPIATNVIFVKDKPAWLDRAWRRIIEEAAAGRQAYVVAPRID
ESDDTDVQGGVRPSATAEGLFSRLRSAELAELRLALMHGRLSADDKDAAMAAFRAGEVDVLVCTTVIEVGVDVPNATVML
VMDADRFGISQLHQLRGRIGRGEHPSVCLLASWVPPDTPAGQRLRAVAGTMDGFALADLDLKERKEGDVLGRNQSGKAIT
LRLLSLAEHEEYIVAARDFCIEAYKNPTDPALALMAARFTSTDRIEYLDKS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
recG CAJ77039.1 ATP-dependent DNA helicase Not tested AbaR1 Protein 6e-73 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
J113_20715 YP_007962839.1 ATP-dependent DNA helicase RecG BAC0356 Protein 1e-60 41