Gene Information

Name : I917_19320 (I917_19320)
Accession : YP_007958764.1
Strain : Mycobacterium tuberculosis Haarlem/NITR202
Genome accession: NC_021192
Putative virulence/resistance : Unknown
Product : type I restriction system adenine methylase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3064216 - 3065838 bp
Length : 1623 bp
Strand : -
Note : COG0286 Type I restriction-modification system methyltransferase subunit

DNA sequence :
ATGCCGCCCAGGAAGAAGCAGGCGCCGCAGGCGCCGTCGACGATGAAGGAGCTCAAAGACACGCTCTGGAAGGCCGCCGA
CAAGCTGCGSGGGTCGCTGRCGSCCAGCCAATACAAGGACGTGATCCTCGGCCTGGTGTTCCTTAAGTACGTGTCCGACG
CGTATGACGAACGGCGCGAGGCAATCCGTGCCGAGTTGGCGGCCGAAGGAATGGAGGAGTCTCAGATAGAAGACCTGATC
GACGATCCCGAGCAGTACCAGGGTTACGGCGTATTCGTCGTGCCGGTGAGTGCGCGCTGGAAGTTCTTGGCAGAGAACAK
AAAAGGCAAGCCAGCCGTTGGTGGTGAGCCGGCGAAGAACATCGGTCAGCTGATCGACGAGGCGATGGACGCGGTAATGA
AGGCCAATCCAACACTCGGTGGGACGCTGCCGAGGCTGTATAACAAGGACAACATCGACCAGCGCCGGCTCGGTGAGCTG
ATCGACCTATTTAACAGTGCGCGCTTCAGCCGGCAGGGCGAGCACCGCGCCCGGGATCTGATGGGTGAGGTCTACGAATA
CTTCCTCGGCAATTTCGCTCGCGCGGAAGGGAAGCGGGGTGGCGAGTTCTTTACCCCGCCCAGCGTGGTCAAGGTGATCG
TGGAGGTGCTGGAGCCGTCGAGTGGGCGGGTGTATGACCCGTGCTGCGGTTCCGGAGGCATGTTTGTGCAGACCGAGAAG
TTCATCTACGAACACGACGGCGATCCGAAGGATGTCTCGATCTATGGCCAGGAAAGCATTGAGGAGACCTGGCGGATGGC
GAAGATGAACCTCGCCATCCACGGCATCGACAACAAGGGGCTCGGCGCCCGATGGAGTGATACCTTCGCCCGCGACCAGC
ACCCGGACGTGCAGATGGACTACGTGATGGCCAATCCGCCGTTCAACATCAAAGACTGGGCCCGCAACGAGGAAGACCCA
CGCTGGCGCTTCGSTSRRCCSCCCGCCAATAACGCCAACTACGCATGGATTCAGCACATCCTGTACAAGTTGGCGCCGGG
AGGTCGGGCGGGCGTGGTGATGGCCAACGGGTCGATGTCGTCGAACTCCAACGGCGAGGGGGATATTCGCGCGCAGATCG
TGGAGGCGGATTTGGTTTCCTGCATGGTCGCGTTACCCACCCAGCTGTTCCGCAGCACCGGAATCCCGGTGTGCCTGTGG
TTTTTCGCCAAAGACAAGGCGGCAGGTAAGCAAGGGTCTATCGACCGGTGCGGGCAGGTGCTGTTCATCGACGCTCGTGA
ACTGGGCGACCTAGTGGACCGGGCCGAGCGGGCGCTGACCAACGAGGAGATCGTCCGCATCGGGGATACCTTCCACGCGT
GGCGCGGGTCGAAGTCGGCTGCCGTCAAAGGGATTATGTACGAGGATGTTCCGGGGTTCTGTAAGTCGGCGACGTTGGCG
GAGATCAAGGCGACCGACTATGCGCTCACGCCGGGGCGGTATGTGGGTACGCCCGCGGTCGAGGACGACGGAGAGCCGAT
CGACGAGAAGATGGCCCGGTTGTCGAAGGCGTTGCTGGAGGCGTTCGATGAGTCGGCGCGGCTGGYAAGGGTCGTGCGGG
AGCAACTGGGGCGGCTTAGATGA

Protein sequence :
MPPRKKQAPQAPSTMKELKDTLWKAADKLRGSLXXSQYKDVILGLVFLKYVSDAYDERREAIRAELAAEGMEESQIEDLI
DDPEQYQGYGVFVVPVSARWKFLAENXKGKPAVGGEPAKNIGQLIDEAMDAVMKANPTLGGTLPRLYNKDNIDQRRLGEL
IDLFNSARFSRQGEHRARDLMGEVYEYFLGNFARAEGKRGGEFFTPPSVVKVIVEVLEPSSGRVYDPCCGSGGMFVQTEK
FIYEHDGDPKDVSIYGQESIEETWRMAKMNLAIHGIDNKGLGARWSDTFARDQHPDVQMDYVMANPPFNIKDWARNEEDP
RWRFXXPPANNANYAWIQHILYKLAPGGRAGVVMANGSMSSNSNGEGDIRAQIVEADLVSCMVALPTQLFRSTGIPVCLW
FFAKDKAAGKQGSIDRCGQVLFIDARELGDLVDRAERALTNEEIVRIGDTFHAWRGSKSAAVKGIMYEDVPGFCKSATLA
EIKATDYALTPGRYVGTPAVEDDGEPIDEKMARLSKALLEAFDESARLXRVVREQLGRLR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hsdM BAH57701.1 type I restriction-modification system DNA methylase Not tested Type-VII SCCmec Protein 4e-118 49
hsdM BAD24842.1 HsdM protein Not tested Type-V SCCmec Protein 6e-117 48
hsdM YP_251979.1 type I restriction-modification system DNA methylase Not tested SCCmec Protein 8e-118 48
api49 CAF28523.1 putative HsdM-like N-methyl transferase Not tested YAPI Protein 3e-103 45