Gene Information

Name : fliP (L083_7715)
Accession : YP_007955705.1
Strain : Actinoplanes sp. N902-109
Genome accession: NC_021191
Putative virulence/resistance : Virulence
Product : flagellar biosynthesis protein FliP
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 8702774 - 8703604 bp
Length : 831 bp
Strand : +
Note : -

DNA sequence : 
ATGTGGCGGCGTGCGGTCATCATCCTTTTGCTCGCCCTCGGCGGGATTCTCCCGGCCGTGGCGGCCCAGGCCGCGCCGCA
GCCGCAGCCCGCGGCCGTGCAGTACCAGGTGCCCCGGGCACCGGTCCCGCCGGTTGCCCCGACCGTCACGCCGAGCGGCG
GGTCCATCAACTTCACCATCAACGGTACGAACCCCGACGGCAGCAAACCCGCCACCTCGCTGGTGATCGTGCTGGGCCTG
ACCCTGCTCTCGGTCGCGCCCGCGGTGCTGCTGCTGTGCACCTGTTTCACCAAGGTCTTCATGGTGCTCGGGATCACCCG
CAACGCCATGGGCCTCACCAGCATGCCGCCCAACCAGGTGCTCGCCGGGCTGGCCCTGTTCATCAGCCTGTTCATCATGG
CGCCGGTGCTGAGCCAGGTGAACGAGCAGGGCGTGCAGCCCTATCTGGCCGGGGACAAGACCCAGTCGCAGGCGTTCAAG
GACGGCGTGCAACCGCTGCGCGACTTCATGGCCAAGAGCACCCGCGAGGACGAACTGCAGCTGCTGATCCGGGTGTCCGG
GCAGCAGAAGCCGGCCAACATCAGCGATGTCGAGCTGACCACGCTGGTGCCCGCGTTCGTGCTGTCGGAGCTGCGGGCCG
CGTTCATCATCGGGTTCGTCATCTTCATCCCGTTCCTGATCATCGACATGGTGGTCTCGGCCTCGCTGATGTCGCTGGGC
ATGATGATGCTGCCGCCTGTGACCGTGGCCATGCCGTTCAAGCTGCTGTTGTTCGTGCTCGTCAACGGGTGGGGGCTGAT
CATCACGGCGCTCGTGGGCTCGTACCGATGA

Protein sequence : 
MWRRAVIILLLALGGILPAVAAQAAPQPQPAAVQYQVPRAPVPPVAPTVTPSGGSINFTINGTNPDGSKPATSLVIVLGL
TLLSVAPAVLLLCTCFTKVFMVLGITRNAMGLTSMPPNQVLAGLALFISLFIMAPVLSQVNEQGVQPYLAGDKTQSQAFK
DGVQPLRDFMAKSTREDELQLLIRVSGQQKPANISDVELTTLVPAFVLSELRAAFIIGFVIFIPFLIIDMVVSASLMSLG
MMMLPPVTVAMPFKLLLFVLVNGWGLIITALVGSYR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcR YP_362153.1 type III secretion system protein Virulence Hrp PAI Protein 8e-27 44
hrcR AAD21321.1 HrcR Virulence Hrp PAI Protein 6e-27 44
hrcR NP_640757.1 type III secretion system protein Virulence Hrp PAI Protein 8e-27 44
hrcR ABA47279.1 HrcR Virulence S-PAI Protein 4e-26 44
hrcR AAB06005.2 HrcR Virulence Hrp PAI Protein 4e-30 44
hrcR AAP34349.1 HrcR Virulence Hrp PAI Protein 3e-26 43
XC_3016 YP_244084.1 type III secretion system protein Virulence Hrp PAI Protein 1e-26 43
hrcR NP_636600.1 type III secretion system protein Virulence Hrp PAI Protein 1e-26 43
hrcR ABQ88359.1 HrcR Virulence Hrp PAI Protein 7e-20 43
hrpW AAB05075.1 HrpW Virulence Hrp PAI Protein 7e-20 43
hrcR YP_198720.1 type III secretion system protein Virulence Hrp PAI Protein 4e-26 43
hrcR BAB07862.1 HrcR Virulence Hrp PAI Protein 2e-25 42
hrcR AAT96200.1 HrcR Virulence T-PAI Protein 9e-21 41
hrcR NP_791222.3 type III secretion protein HrcR Virulence Hrp PAI Protein 2e-21 41
hrcR AAT96146.1 HrcR Virulence T-PAI Protein 9e-21 41
hrcR AAG33884.1 HrcR Virulence Hrp PAI Protein 2e-21 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliP YP_007955705.1 flagellar biosynthesis protein FliP VFG1259 Protein 8e-43 49
fliP YP_007955705.1 flagellar biosynthesis protein FliP VFG2338 Protein 2e-37 48
fliP YP_007955705.1 flagellar biosynthesis protein FliP VFG2494 Protein 3e-40 48
fliP YP_007955705.1 flagellar biosynthesis protein FliP VFG2016 Protein 2e-40 41