Gene Information

Name : cutR (L083_6950)
Accession : YP_007954940.1
Strain : Actinoplanes sp. N902-109
Genome accession: NC_021191
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 7914900 - 7915580 bp
Length : 681 bp
Strand : -
Note : -

DNA sequence : 
ATGCGGTTGCTGGTGGTGGAGGACGAGGAAGATCTGGCCGAGGGGCTGCGGGCGGGGCTGACCCGGACCGGGTACGCGGT
GGACGTCGCCGGCACCTCGGCGCAGGCCTACGACCGGCTGATCGTCAACGAGTACGACCTCATGCTGCTCGACGTCAACC
TGCCCGACGGCGACGGGTTCGCGCTGTGCCGCTCGCTGCGGGACGGCACCCTGCGGACCCCGGGCGACCATGACGTACGG
GTCCTGATGCTCACCGCCCGCGGCCGCGTCGAGGACCGGGTCCGCGGTCTCGACGAGGGCGCCGACGACTACCTGGTCAA
GCCGTTCGCGCTGGCCGAGCTGCTGGCCCGGGTCCGGGCCCTGCTGCGCCGCGACACCAACGGGTCGTCGGCGGTGGTGC
GGGCCGGCGATCTGGTGCTCGACGTCGCCCGGCACACGGTGACCAGGGCCGGTGAGCCGCTGACGCTGACGCCCAAGGAG
TTCGGCATCCTGGAGTACCTGATGCACCGCCCCGGGCACGTGGTGTCGAGCGAGGAACTGCTCGAGCACGTGTGGGACGC
CAACGCCGACCCGTTCACCCAGACCGTCCGGGTCACCGTCGGCACGCTGCGCCGCAAGCTCGGCGAGGGCTCGATCGACA
CCGTGGTGAGCCGCGGCTACCGGCTGCGGACGCCGTCATGA

Protein sequence : 
MRLLVVEDEEDLAEGLRAGLTRTGYAVDVAGTSAQAYDRLIVNEYDLMLLDVNLPDGDGFALCRSLRDGTLRTPGDHDVR
VLMLTARGRVEDRVRGLDEGADDYLVKPFALAELLARVRALLRRDTNGSSAVVRAGDLVLDVARHTVTRAGEPLTLTPKE
FGILEYLMHRPGHVVSSEELLEHVWDANADPFTQTVRVTVGTLRRKLGEGSIDTVVSRGYRLRTPS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-23 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cutR YP_007954940.1 winged helix family two component transcriptional regulator BAC0083 Protein 6e-26 45
cutR YP_007954940.1 winged helix family two component transcriptional regulator Y16952.3.orf35.gene. Protein 2e-28 43
cutR YP_007954940.1 winged helix family two component transcriptional regulator U82965.2.orf14.gene. Protein 1e-27 43
cutR YP_007954940.1 winged helix family two component transcriptional regulator BAC0487 Protein 2e-23 43
cutR YP_007954940.1 winged helix family two component transcriptional regulator BAC0638 Protein 4e-19 42
cutR YP_007954940.1 winged helix family two component transcriptional regulator BAC0197 Protein 2e-25 42
cutR YP_007954940.1 winged helix family two component transcriptional regulator BAC0111 Protein 4e-28 41
cutR YP_007954940.1 winged helix family two component transcriptional regulator BAC0125 Protein 6e-23 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cutR YP_007954940.1 winged helix family two component transcriptional regulator VFG0473 Protein 4e-25 44
cutR YP_007954940.1 winged helix family two component transcriptional regulator VFG0596 Protein 6e-24 41