Gene Information

Name : L083_5129 (L083_5129)
Accession : YP_007953119.1
Strain : Actinoplanes sp. N902-109
Genome accession: NC_021191
Putative virulence/resistance : Virulence
Product : ATPase AAA-2 domain-containing protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5882460 - 5884964 bp
Length : 2505 bp
Strand : -
Note : -

DNA sequence :
ATGAGCTCCAGTGACTGGGACGACCTTTTCGCCCGCTTCTTCGCAGGCGGCGAACCCCGCCGGTCCGCGCAGCGGATCGA
CATCATGCGTTTCATGAGCGCGGACGCCCGGGAGATCCTCTCCGACGCCGCGCGCCGGGCCGCCACAGTGGCCCCGGCCG
GGTCCGACCTGGCCGATCTGGACACCGACCATCTGCTGTGGGCGCTGCTGCAGCGCGACCCGCAGAAGGCCCTGGTACGC
CGTGCCGGTGCCGACCCCGACGCCCTGCTCGCCGAGCTCGAGCGCGGCACCGCCGCCGCCGGTCCGCGCACCGAGCGGGT
GGCGCTGACCCCCGCGGCCAAGCGTGCCCTGCTGGACAGCCTGCAGATCTCGCGGGCGCTCGGTGCGTCCTACGTGGGCC
CCGAGCATCTGCTGATGGGCCTGGGCATCAACCCCGATTCCGCAGCCGGGCGGCTGCTCGCCGGTCGCCTCGACCCCCGT
ACGTTGCAGCAGGCCGAGCCGCAGACCGGCGGCGGCCAGGGAGGTGGCACCACGAACACCCCGACCCTCGAGCAGTTCGG
CGTCGACCTGACCGACCTCGCCCGCCGCGGCGAGATCGACCCGGTGATCGGGCGCGCGGACGAGATCGAGCAGGCCGTCG
AGATCCTCTCGCGGCGCACCAAGAACAACCCCGTGCTGATCGGCGAGGCCGGCGTCGGCAAGACCGCGATCGTCGAGGGC
CTGGCCCAGCGCATCGTGGACGGCGACGTCCCGCAGACCCTGGCCGGCAAGCGGGTCATCCAGCTCGACCTGGCCGGTCT
GGTGGCCGGCACCCGCTACCGCGGCGACTTCGAGGAGCGGCTGCGCAAGGTCATCGACGAGATCCAGGACTCCGGCGACG
GGCTGATCATCTTCCTCGACGAGATCCACACCATGGTCGGGGCCGGTGGTGGCGGCGGCGAGGGTGGCGGCATGGACGCC
TCCAACATGCTCAAGCCCGCCCTGGCCCGCGGCCGGCTGCGCGTCGTGGGCGCGACCACGCTGGACGAGTACCGCCGCCA
CATCGAGAAGGACGCGGCGCTGGCCCGGCGTTTCCAGCCGGTGCTGGTCGGCGAGCCCAGCGTCGAGGACACCGTGCAGA
TCCTGCGCGGCCTGCGCGACAACTACGAGGCGCACCACCAGGTCCGGATCATCGACGAGGCCCTGGACGCCGCGGCGGAG
CTGTCCGACCGGTACATCACCGACCGGTTCCTGCCCGACAAGGCCATCGACCTGATCGACCAGGCCGGTGCCCGGGTCCG
GCTGCGGGTCAAGACCCAGCCCGCGGACGTACGGGACCAGGAGCGCCGCCTCGAGCAGCTCACCCGCGACCGCGACCAGG
CGGTGGCGGCCGAGAACTACGAGAAGGCGTCCGAGCTGCGCGACCGGATCAACGCCGTCAAGGCGCAGATCGAGGACGCG
GCCGGCGGCGCGGACGGGGTGCCGCAGGTGACCCCGGCCGACATCGCCGAGGTGGTCTCCCGGGCCACCGGCATCCCGGT
CGCCCAGCTCACCGAGGAGGAACGCGAGCGGCTGCTGCGCCTGGAGGGCCACCTGCACGACCGGGTGGTCGGCCAGGAGG
AGGCCGTCGCTGCGGTCGCCGAGGCGGTGCGGCGCTCGCGGGCCGGGCTCGGTGACCCGGACCGGCCGGTGGGCAGCTTC
CTGTTCCTCGGCCCGACCGGTGTCGGCAAGACCGAGCTGGCGCGGTCGCTCGCCGAGGCGCTGTTCGGCGAGCAGGACCG
GATGATCCGGCTGGACATGAGCGAGTTCCAGGAGCGGCACACCGTCTCCCGGCTCGTCGGTGCCCCTCCCGGCTACGTCG
GCTACGACGAGGCCGGCCAGCTCACTGAGGCCGTGCGCCGGCGCCCGTACTCGGTGGTGCTGCTGGACGAGATCGAGAAG
GCCCACCCGGACGTGTTCAACATCCTGCTCCAGGTGCTGGACGACGGGCGGCTGACCGACAGCCAGGGCCGCACGGTGAG
CTTCAAGAACACCGTGCTGATCATGACCAGCAACATCGGCTCCGAGATCATCAACGGCAGCAAGCGCACCCTGGGCTTCG
GCGCGGCCGACGACGGCGTGGCCGAGGACCGGGACCTGCGCGAGCGGCTCGACCGCCGGCTGCGCGAGCAGTTCCGCCCC
GAGTTCATCAACCGGATCGACGAGATCATGATCTTCCGGCAGCTCGAGACGGCTCAGCTGCGCCAGATCACCGAGCTGCT
GCTCGCCGAGACCCGGCGGCGCCTGCACGCCCAGGACATCGCCCTGGACGTCAGCACCGAGGCGGTCGACTGGCTCGCCG
AGCGCGGGTTCCAGCCCGAGTACGGGGCCCGGCCGCTGCGCCGCACGATCCAGCGCGAGCTGGACAACCCGCTCTCGCGG
ATGCTGCTCGCCGCGGACCTCGCGCCCGGGCAGACCGTCCACGTCGGTGTCGCGGACGGCCGGCTGACCCTCACGGCCGG
CACCCCCGAACCGGCGTCCGTCTGA

Protein sequence :
MSSSDWDDLFARFFAGGEPRRSAQRIDIMRFMSADAREILSDAARRAATVAPAGSDLADLDTDHLLWALLQRDPQKALVR
RAGADPDALLAELERGTAAAGPRTERVALTPAAKRALLDSLQISRALGASYVGPEHLLMGLGINPDSAAGRLLAGRLDPR
TLQQAEPQTGGGQGGGTTNTPTLEQFGVDLTDLARRGEIDPVIGRADEIEQAVEILSRRTKNNPVLIGEAGVGKTAIVEG
LAQRIVDGDVPQTLAGKRVIQLDLAGLVAGTRYRGDFEERLRKVIDEIQDSGDGLIIFLDEIHTMVGAGGGGGEGGGMDA
SNMLKPALARGRLRVVGATTLDEYRRHIEKDAALARRFQPVLVGEPSVEDTVQILRGLRDNYEAHHQVRIIDEALDAAAE
LSDRYITDRFLPDKAIDLIDQAGARVRLRVKTQPADVRDQERRLEQLTRDRDQAVAAENYEKASELRDRINAVKAQIEDA
AGGADGVPQVTPADIAEVVSRATGIPVAQLTEEERERLLRLEGHLHDRVVGQEEAVAAVAEAVRRSRAGLGDPDRPVGSF
LFLGPTGVGKTELARSLAEALFGEQDRMIRLDMSEFQERHTVSRLVGAPPGYVGYDEAGQLTEAVRRRPYSVVLLDEIEK
AHPDVFNILLQVLDDGRLTDSQGRTVSFKNTVLIMTSNIGSEIINGSKRTLGFGAADDGVAEDRDLRERLDRRLREQFRP
EFINRIDEIMIFRQLETAQLRQITELLLAETRRRLHAQDIALDVSTEAVDWLAERGFQPEYGARPLRRTIQRELDNPLSR
MLLAADLAPGQTVHVGVADGRLTLTAGTPEPASV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 1e-154 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
L083_5129 YP_007953119.1 ATPase AAA-2 domain-containing protein VFG0079 Protein 8e-171 53
L083_5129 YP_007953119.1 ATPase AAA-2 domain-containing protein VFG0080 Protein 1e-137 53