Gene Information

Name : L083_4966 (L083_4966)
Accession : YP_007952956.1
Strain : Actinoplanes sp. N902-109
Genome accession: NC_021191
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5728114 - 5728899 bp
Length : 786 bp
Strand : -
Note : -

DNA sequence : 
ATGTACCCGCAGTCCCCGGCCGTCGCCCCGGCGGCCCCCGATGGTCTGGACGACGGCCGGACCGCCGTCGCGGCCGTGGA
CCTGGTCAAGGTGTACGGCACCGGCGACACCGCCGTCCGGGCGCTCGACGGGGTCACCGTCGGCTTCGCCCGCGCCCGGT
TCACCGCCATCATGGGACCGTCCGGCTCCGGCAAGTCGACGCTGATGCACTGCCTGGCCGGGCTCGACACGGCCACCTCC
GGGCGCGCGCTGCTGGGCGGCACCGACCTGACCGTGCAGAGCGACCGGGTGCTCACCAAGGTGCGCCGCGAGCGGATCGG
CTTCGTGTTCCAGTCGTTCAACCTGCTGCCGCAGCTCACCGCCGAGCAGAACATCACGCTGCCGCTGGAGCTGGCCGGCC
GGCGGCCCGAGCGTGGGCTGCTGGCCCGGCTGTCCGAGCAGCTGGGCCTGACCGGCCGGCTCGCGCACCGCCCCGGCGAG
CTGTCCGGCGGCCAGCAGCAGCGGGTGGCCGTCGCCCGGGCGCTGATCTCGCGGCCCGAGGTCGTGTTCGCCGACGAACC
GACCGGCAACCTGGACTCGCGCTCCGGCGCCGAGGTGCTGTCGTTCCTGCGGACCTCGGTACGGGAGCTGGGCCAGACCG
TCGTGATGGTGACCCACGACCCGGGCGCCGCCGCGTACGCCGACCGCGTCGTGCTGCTGGCCGACGGGCGGATCGCCGGT
GACCTGGCAGACCCGGACCGCGCCGCGATCGCCGACGCCCTGCAGGAGCTGGGGGCGCGCCGGTGA

Protein sequence : 
MYPQSPAVAPAAPDGLDDGRTAVAAVDLVKVYGTGDTAVRALDGVTVGFARARFTAIMGPSGSGKSTLMHCLAGLDTATS
GRALLGGTDLTVQSDRVLTKVRRERIGFVFQSFNLLPQLTAEQNITLPLELAGRRPERGLLARLSEQLGLTGRLAHRPGE
LSGGQQQRVAVARALISRPEVVFADEPTGNLDSRSGAEVLSFLRTSVRELGQTVVMVTHDPGAAAYADRVVLLADGRIAG
DLADPDRAAIADALQELGARR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-38 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-41 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 8e-41 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-41 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
L083_4966 YP_007952956.1 ABC transporter NC_008702.1.4606598. Protein 5e-36 48
L083_4966 YP_007952956.1 ABC transporter NC_012469.1.7686878. Protein 2e-42 46
L083_4966 YP_007952956.1 ABC transporter CP001581.1.gene798.p Protein 3e-44 46
L083_4966 YP_007952956.1 ABC transporter CP001581.1.gene598.p Protein 3e-48 43
L083_4966 YP_007952956.1 ABC transporter NC_012469.1.7686946. Protein 4e-25 41