Gene Information

Name : L083_3921 (L083_3921)
Accession : YP_007951911.1
Strain : Actinoplanes sp. N902-109
Genome accession: NC_021191
Putative virulence/resistance : Virulence
Product : winged helix family two-component system transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4630004 - 4630681 bp
Length : 678 bp
Strand : -
Note : -

DNA sequence : 
GTGAGCCGCATCCTCGTCGTGGACGATGACGACCAGCTACGGCGGGCGCTGCGGATCAACCTCAGCGCCCGCAAGTACGA
CGTCAGCACCGCCGCCGACGGCACCTCCGCCCTGACCACCGCCGGGCACACCCCACCCGACCTCGCCCTGGTCGACCTCG
GCCTGCCCGACATGGACGGCGTCGACGTCGTCCGCGGCCTGCGCGGCTGGACCAGCATCCCGATCATCATCCTGTCCGCC
CGCGACGACCAGGCCGGCAAGGTACAGGCCCTCGACGCCGGCGCCGACGACTACGTCACCAAACCGTTCGGCCTCGACGA
ACTGCTCGCCCGCATCCGGGCTGCCCTGCGCCGCGCCGCGCCGCACCCCGAAGCCGCCGAGATCACGACCGCCGACTTCA
CCATCGACCTGGGCGCCAAACGCCTCACCAGCGCCGCCGGCACCGACATCCGCCTCACCCCCATCGAATGGCGGATGCTG
GAGGCCCTGGCCCGCCACCCCGACAAACTCGTCGCCCAGAAACAACTGCTGCGCGAGGTGTGGGGCCCGCAGTACGAGAA
CGAAACCGGCTACCTGCGCGTCCACCTGGCCAACCTGCGCCGCAAGCTCGAACCCGACCCGGGCCGCCCGCGCTACCTGA
TCACCGAACCGGGCATCGGCTACCGCTTCACCCCTTGA

Protein sequence : 
MSRILVVDDDDQLRRALRINLSARKYDVSTAADGTSALTTAGHTPPDLALVDLGLPDMDGVDVVRGLRGWTSIPIIILSA
RDDQAGKVQALDAGADDYVTKPFGLDELLARIRAALRRAAPHPEAAEITTADFTIDLGAKRLTSAAGTDIRLTPIEWRML
EALARHPDKLVAQKQLLREVWGPQYENETGYLRVHLANLRRKLEPDPGRPRYLITEPGIGYRFTP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0571 NP_814337.1 DNA-binding response regulator Not tested Not named Protein 1e-35 42
ef0091 AAM75294.1 EF0091 Not tested Not named Protein 7e-36 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
L083_3921 YP_007951911.1 winged helix family two-component system transcriptional regulator AE000516.2.gene3505. Protein 2e-31 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
L083_3921 YP_007951911.1 winged helix family two-component system transcriptional regulator VFG1390 Protein 2e-25 43