Gene Information

Name : L083_3190 (L083_3190)
Accession : YP_007951180.1
Strain : Actinoplanes sp. N902-109
Genome accession: NC_021191
Putative virulence/resistance : Virulence
Product : adenylate ligase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3795283 - 3796902 bp
Length : 1620 bp
Strand : -
Note : -

DNA sequence : 
ATGTCCGTGACGGCATGGCCCGGTGAGCTGGCGCACCGCTATGTGGCCCGCGGCTACTGGGAGCAGCGGCCGCTGGGCGC
CTACCTGGACGCGGCCGCCGCGGCCCGCCCGGACGAGATCTGCCTGGTCGACGCAACGGTGTCGCTGACGTTCGCCGAGC
TGGTGTCCCGGGTGGACGGCGCCGCCGCGCGGCTGCGGGCGCTGGGCCTGTCGGCCGGTGACCGGGTCGTTGTGCAGCTG
CCGAACTGCTGGGAGTTCGTGGTCGCCACGCTGGCCTGTTTCCGCAGCGGCGTGGCGCCGGTGATGGCGCTGCCCGCGCA
CCGGCGCCAGGAGGTGACGGCCGTTGCCCGGCTCACCGGCGCGCGGGCCCTGCTGGTGGCCGCCACGGTCAAGGGTTTCG
ACCACGAGCGGCTGGCGCACGAGGTCGCCGCCGAGGTGCCCGACCTGAAACACGTCCTGGTGACCGGGCACCGGCAGCGG
CCGGACAGCCTGGACCTGGCGGCCCTGTGCGCCCCGGCGGACGGCGCGGCGCCCGGCCTGGCCCCGCCGGACCCCGCGGA
CGTCGCGCTGTTCCTGCTGTCCGGGGGGACCACGGGCCGGCCCAAGCTGATCCCGCGCACGCACAACGACTACGCGTACA
TGATGCGCCGGGCCGCGCAGATCTGCGGCGCCGGCCCGGGCACGGTCTACCTGGCCGTGCTGCCGCTGGCGCACGGCTAC
CCGATGGCCGGCCCGGGTCTGCTGGGCACGCTGCTCGGCGGCGGGCGGGCGGTGATCCTGCCGTCGCCGGCGCCGGAACG
CGCGCTCGCCGCGGTCGCCGAGCACCGGGTCACCATGACGTCCCTGGTCCCGGCCGCGGTGACCCGCTGGCTGGAGCACC
TGGGCACGGCCCCGGCACCCGACCTGAGCTCACTGGAGCTGGTGCAGGTGGCCGGGTCGCGGCTGCCCGACGAGGTGGCC
GCCCGGGTCAGCCCGGCGTTGGGCGCCCGGCTGCAGCAGGTGTACGGGATGGCCGAGGGACTGCTGTGCATGACCCGGCC
GGCCGACCCGGACGAGGTGGTGCACCACACCCAGGGCCGGCCGATCTGCCCCGACGACGAGCTGCTGCTGGTCGACGAGG
ACGGTGCCCCGGTGCCACCCGGCGAGCCCGGCATCCTGCTCACCCGTGGGCCGTACACCCCGCGCGGCTACTACCGCGAG
CCGGAGCTGACGGCGGCCGCCTACCCGCCCGGCGGCTGGTACCGCACCGGTGACGTGGTGCGGCTGCGCCCCGACGGCAA
CCTGGTGATCGAGGGCCGGGACAAGGACCTGATCAACCGTGGTGGCGAGAAGATCGCCGCCGAGGAGGTGGAGAACTACG
CCCACCAGCTCCCCGCGGTGAGCCTGGCCGCCGCGGTCGCCATGCCCGATCCCGAGCTCGGCGAGCGGGTCTGCCTCTAT
GTCGTGGCCCGGCCCGGCACCGAGGTCACGCTGGCGCAGGTGCGCGACGTGATGCGCGAGGCCGGGGTGGCCGCGTTCAA
GCTGCCCGACCGGCTCGTGCCGGTGGACGCCCTGCCGGTCACCGCGATCGGCAAGGTCGACAAGAAGGCGCTGCGGGCCG
ACATCGCCCGCCGACTGTGA

Protein sequence : 
MSVTAWPGELAHRYVARGYWEQRPLGAYLDAAAAARPDEICLVDATVSLTFAELVSRVDGAAARLRALGLSAGDRVVVQL
PNCWEFVVATLACFRSGVAPVMALPAHRRQEVTAVARLTGARALLVAATVKGFDHERLAHEVAAEVPDLKHVLVTGHRQR
PDSLDLAALCAPADGAAPGLAPPDPADVALFLLSGGTTGRPKLIPRTHNDYAYMMRRAAQICGAGPGTVYLAVLPLAHGY
PMAGPGLLGTLLGGGRAVILPSPAPERALAAVAEHRVTMTSLVPAAVTRWLEHLGTAPAPDLSSLELVQVAGSRLPDEVA
ARVSPALGARLQQVYGMAEGLLCMTRPADPDEVVHHTQGRPICPDDELLLVDEDGAPVPPGEPGILLTRGPYTPRGYYRE
PELTAAAYPPGGWYRTGDVVRLRPDGNLVIEGRDKDLINRGGEKIAAEEVENYAHQLPAVSLAAAVAMPDPELGERVCLY
VVARPGTEVTLAQVRDVMREAGVAAFKLPDRLVPVDALPVTAIGKVDKKALRADIARRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ybtE CAA21394.1 - Virulence HPI Protein 2e-72 46
ybtE AAA93464.1 yersiniabactin 2,3-dihydoxybenzoate-AMP ligase Virulence HPI Protein 1e-72 46
irp5 YP_002346898.1 yersiniabactin siderophore biosynthetic protein Virulence HPI Protein 2e-72 46
ybtE NP_669710.1 salicyl-AMP ligase Virulence HPI Protein 2e-72 46
ybtE NP_993003.1 yersiniabactin siderophore biosynthetic protein Virulence HPI Protein 2e-72 46
ybtE YP_070120.1 yersiniabactin siderophore biosynthetic protein Virulence HPI Protein 2e-72 46
ybtE YP_853079.1 yersiniabactin siderophore biosynthetic protein Virulence PAI IV APEC-O1 Protein 2e-72 45
irp5 CAA73130.1 Irp5 protein Virulence HPI Protein 2e-72 45
irp5 YP_001006819.1 yersiniabactin siderophore biosynthetic protein Virulence HPI Protein 3e-72 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
L083_3190 YP_007951180.1 adenylate ligase VFG0168 Protein 1e-87 47
L083_3190 YP_007951180.1 adenylate ligase VFG1817 Protein 2e-79 47
L083_3190 YP_007951180.1 adenylate ligase VFG0932 Protein 1e-83 43