Gene Information

Name : L083_3140 (L083_3140)
Accession : YP_007951130.1
Strain : Actinoplanes sp. N902-109
Genome accession: NC_021191
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3739148 - 3739909 bp
Length : 762 bp
Strand : +
Note : -

DNA sequence :
GTGACCGCCACGACGTCGGCCGTGGCCGCGCACCAGCTGACGAAGGTCTACGGCACGGACACCGCCCGGGTGGTCGCGCT
CGACGCGGTGGACGTGCAGATCCCCGACGGCCGCCTGGTCGCCGTCATGGGTCCGTCCGGGTCGGGCAAGTCGACCCTGA
TGCACTGCCTGGCCGGGCTGGACACCCCGACCAGCGGGCAGGTCATGCTGGGCGACGTCGAGCTGAGCCGGCTCAACGAC
AACCAGCTGACCCGGTTGCGCCGGGACCGGATCGGCTTCGTCTTCCAGGCCTTCAACCTGGTGCCGGCGCTGACCGCCCG
GGAGAACATCCTGCTGCCGCTGCGGATCGCCGGCCGCCGCCCGGACGAACGGCGGCTCGCCGAGCTGGCCGCCGCGGTCG
GGCTGGAGAACCGCCTCGACCACCGGCCGGACCAGCTGTCCGGCGGTCAGCAGCAGCGGCTGGCCTGCGCCCGGGCCCTG
ATCACCGACCCGCGGGTGGTCTTCGCCGACGAGCCCACCGGCAACCTCGACTCGCAGAGCAGCGCCGAGGTCATGGGTCT
GCTGCGCCGGGCCGTCGATCAGCTCGGCCAGACCGTGGTCCTGGTGACCCACGACCCGGTGGCCGCCGGTTACGCCGATC
TGGTGCTCTTCCTCGCCGACGGCCGGCTGGTGGGCGAGTTGCCCGAGCCGACCGCCGAGCTCGTGCTGGCCCGGATGCAA
CGGCTGTCCGGCATCCGTCCGACCGGCCGGGAACGGGGCTGA

Protein sequence :
MTATTSAVAAHQLTKVYGTDTARVVALDAVDVQIPDGRLVAVMGPSGSGKSTLMHCLAGLDTPTSGQVMLGDVELSRLND
NQLTRLRRDRIGFVFQAFNLVPALTARENILLPLRIAGRRPDERRLAELAAAVGLENRLDHRPDQLSGGQQQRLACARAL
ITDPRVVFADEPTGNLDSQSSAEVMGLLRRAVDQLGQTVVLVTHDPVAAGYADLVLFLADGRLVGELPEPTAELVLARMQ
RLSGIRPTGRERG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 3e-29 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-37 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-37 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-37 41
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-37 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
L083_3140 YP_007951130.1 ABC transporter CP001581.1.gene598.p Protein 4e-46 48
L083_3140 YP_007951130.1 ABC transporter NC_008702.1.4606598. Protein 5e-37 48
L083_3140 YP_007951130.1 ABC transporter CP001581.1.gene798.p Protein 2e-40 45
L083_3140 YP_007951130.1 ABC transporter NC_012469.1.7686878. Protein 1e-38 43
L083_3140 YP_007951130.1 ABC transporter NC_012469.1.7685735. Protein 2e-31 41