Gene Information

Name : L083_2918 (L083_2918)
Accession : YP_007950908.1
Strain : Actinoplanes sp. N902-109
Genome accession: NC_021191
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3339852 - 3340523 bp
Length : 672 bp
Strand : +
Note : -

DNA sequence : 
ATGGGCACCGTCTTGCTGATCGAGGACGACGACCGGATCCGGCTGTCGCTGGCCATGGCGTTGGAGGACGAGGGTTACAC
AGCGCACGCCGTGGCCACGGCGGAGGAGGGGCTGGCCGCGCAGCGGCGGCAACCCGCCGACACGGTGCTGGTGGACCTCA
TGCTGCCGGGCATGGACGGTTTTCAGTGCATCCGGGAGCTACGGCGTGACGACGACGTCCCGATCGTGGTCATCAGTGCC
CGCGACGACACCCACGACATCGTCGCCGGGCTGGAGGCGGGCGCCGACGACTACATCGTCAAGCCGGTGGCGGTCAAGGA
GCTCGCCGCCCGGTTGCGCGCCCTGCGCCGGCGTAGCCGGGTGGAGCCGCAGATCAGCACCATCACGTTCGGCGAGCTCG
ACATCCGCCCGGAGGCCGGGGAGGTGCTGTGCGGCGGGCGGCCGGTTGCGGTCACCCGTACCGAATTCCGCTTGTTGTGC
GAACTTGCCGGCCATCCCGGGCAGGTGATGTCGCGCCAGCAGTTGCTGCAGCGCGTGTGGGGCTACGAGGTCGGTGACGA
GCGGCTCGTGGACGTGCACGTCGGCCGGTTGCGGCAGAAGATCGAGCCGGACTCCGGCAACCCGCGGCATCTGGTCACCG
TCCGCGGTCTCGGGTACAAGCTGCGCCGATGA

Protein sequence : 
MGTVLLIEDDDRIRLSLAMALEDEGYTAHAVATAEEGLAAQRRQPADTVLVDLMLPGMDGFQCIRELRRDDDVPIVVISA
RDDTHDIVAGLEAGADDYIVKPVAVKELAARLRALRRRSRVEPQISTITFGELDIRPEAGEVLCGGRPVAVTRTEFRLLC
ELAGHPGQVMSRQQLLQRVWGYEVGDERLVDVHVGRLRQKIEPDSGNPRHLVTVRGLGYKLRR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 7e-24 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
L083_2918 YP_007950908.1 winged helix family two component transcriptional regulator AE000516.2.gene3505. Protein 4e-37 46
L083_2918 YP_007950908.1 winged helix family two component transcriptional regulator NC_002516.2.879194.p Protein 2e-21 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
L083_2918 YP_007950908.1 winged helix family two component transcriptional regulator VFG1389 Protein 2e-26 43
L083_2918 YP_007950908.1 winged helix family two component transcriptional regulator VFG1390 Protein 7e-31 42
L083_2918 YP_007950908.1 winged helix family two component transcriptional regulator VFG1563 Protein 4e-24 41