Gene Information

Name : L083_0182 (L083_0182)
Accession : YP_007948172.1
Strain : Actinoplanes sp. N902-109
Genome accession: NC_021191
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 195443 - 196204 bp
Length : 762 bp
Strand : -
Note : -

DNA sequence :
GTGAATACACAGCGCATCGAAGCCGTGGTCCGGGTCGAGCAGCTCACCCGGATCTACCAGACCGGCGGCCAGCCGGTGAC
CGCTCTGACAGGTGTGGACGCCGCCTTCTACCGCGGCACGTTCACCGCTGTCATGGGTCCCTCGGGCTCCGGCAAGAGCA
CGCTGCTGCAGGCGTGCGCCGGCCTCGACCGGCCCACCTCCGGCCGGGTGTGGATCGGTGACACCGAGCTCTCCCGGCTG
TCCGAGACCAAGCTGACCAAGCTGCGCCGCAACCGCATCGGCTTCGTCTTCCAGGCGTTCAACCTGATCGGCGCGCTCAC
CGTCGAGGACAACATCCTGCTGCCGCTGCGGCTGGCCGGCGTCCGCCCCGACCGGGCGTGGATCACCGAGGTGGTCGACC
GGGTCGGCCTCGCCGACCGCCTGCAGTATCGGCCGGCCGCGCTGTCCGGCGGCCAGCAGCAGCGGGTGGCGATCGCCCGG
GCGCTGGCCACCCGCCCCGAGGTCATCTTCTGCGACGAGCCCACCGGCGCGCTGGACACGCAGACCGCCGCCGACGTGCT
GGCACTGTTGCGCTCGGTGGTGGACGCGCACGGGCAGACCGTGGTCATGGTGACGCACGACCCGGTGGCCGCCTCGTATG
CCGACCGGGTCGTGGTGCTGGCCGACGGCCACATCCGCCGCGACCTGCCGCAGCCCGGTGCCGAGCGGATCGCCGAGCAG
CTCGCCGCCCTCGGCCGGCAGCGCGTGGCGCAGGGGGTCTGA

Protein sequence :
MNTQRIEAVVRVEQLTRIYQTGGQPVTALTGVDAAFYRGTFTAVMGPSGSGKSTLLQACAGLDRPTSGRVWIGDTELSRL
SETKLTKLRRNRIGFVFQAFNLIGALTVEDNILLPLRLAGVRPDRAWITEVVDRVGLADRLQYRPAALSGGQQQRVAIAR
ALATRPEVIFCDEPTGALDTQTAADVLALLRSVVDAHGQTVVMVTHDPVAASYADRVVVLADGHIRRDLPQPGAERIAEQ
LAALGRQRVAQGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-38 46
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-38 46
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-38 46
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-35 45
irp6C NP_938506.1 ATP-binding protein Irp6C Not tested Not named Protein 2e-15 41
irp6C YP_005124377.1 ATP-binding protein Irp6C Virulence Not named Protein 1e-15 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
L083_0182 YP_007948172.1 ABC transporter CP001581.1.gene598.p Protein 2e-46 46
L083_0182 YP_007948172.1 ABC transporter CP001581.1.gene798.p Protein 6e-44 45
L083_0182 YP_007948172.1 ABC transporter NC_008702.1.4606598. Protein 2e-37 45
L083_0182 YP_007948172.1 ABC transporter NC_012469.1.7686878. Protein 8e-43 44
L083_0182 YP_007948172.1 ABC transporter NC_012469.1.7685735. Protein 8e-34 41