Gene Information

Name : L083_1564 (L083_1564)
Accession : YP_007949554.1
Strain : Actinoplanes sp. N902-109
Genome accession: NC_021191
Putative virulence/resistance : Virulence
Product : hemin ABC superfamily ATP binding cassette transporter, ABC protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1705582 - 1706364 bp
Length : 783 bp
Strand : +
Note : -

DNA sequence : 
ATGGGGCTGGCCGCGCGCGACATCACCGTCGGGTACGACAAGAAGACGATCAGCGAGCACCTGTCGCTGGAGGTCCTGCC
GGGCCGGTTCACCGCGATCATCGGGCCGAACGCCTGCGGCAAGTCCACCCTGCTGCGGGCGCTGTCCCGGCTGCTCAAGC
CGGCGGCCGGCGAGGTGCTGCTGGACGGCCGGGACATCCACTCGCGACCGGCCAAGGAAGTGGCCCGCCGGTTGGGGCTG
CTGCCGCAGTCGTCCGTCGCGCCGGACGGCATCACGGTGGCCGAGCTGGTTGCCCGGGGCCGGTTCCCGCACCAGAAGCT
GATCCGGCAGTGGTCGCCCGCGGACGAGGAGGCCGTGGTGACCGCGATGGCCGCGACCGGGGTCAGCGAGTTGTCCGGCG
ACCTGGTCGACACGCTCTCCGGTGGCCAGCGTCAGCGCGTGTGGGTGGCCATGGTGCTGGCCCAGCAGACCCCGATCGTG
CTGCTCGACGAGCCCACCACGTTCCTCGACATCGCGCATCAGATCGAGCTGCTGGAGCTGTGCGTACGGCTCAACCGGGA
GCAGGGCACCACGATGGTGGCGGTGCTGCACGACCTCAACCAGGCCGCCCGGTACGCCGACCACCTGGTGGTGATGCGGG
CCGGTGCGATCGTCGCGCAGGGCAAGCCGGCCGAAGTGATGACCGCCGATCTCATCGGGTCGGTGTTCGGGCTGGGCTGC
CGGATCATCGACGACCCGGAGACGCACACCCCGCTGGTGATTCCGCGCTCCGGCTTAGGCTAG

Protein sequence : 
MGLAARDITVGYDKKTISEHLSLEVLPGRFTAIIGPNACGKSTLLRALSRLLKPAAGEVLLDGRDIHSRPAKEVARRLGL
LPQSSVAPDGITVAELVARGRFPHQKLIRQWSPADEEAVVTAMAATGVSELSGDLVDTLSGGQRQRVWVAMVLAQQTPIV
LLDEPTTFLDIAHQIELLELCVRLNREQGTTMVAVLHDLNQAARYADHLVVMRAGAIVAQGKPAEVMTADLIGSVFGLGC
RIIDDPETHTPLVIPRSGLG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 3e-66 55
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 3e-66 55
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 3e-66 55
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 3e-66 55
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 5e-65 54
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 2e-52 50
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 9e-63 49
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 9e-63 49
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 9e-53 47
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-49 45
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-49 45
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-49 45
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-49 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
L083_1564 YP_007949554.1 hemin ABC superfamily ATP binding cassette transporter, ABC protein BAC0164 Protein 1e-52 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
L083_1564 YP_007949554.1 hemin ABC superfamily ATP binding cassette transporter, ABC protein VFG0925 Protein 4e-77 63
L083_1564 YP_007949554.1 hemin ABC superfamily ATP binding cassette transporter, ABC protein VFG1042 Protein 9e-53 50