Gene Information

Name : fepD (L083_1562)
Accession : YP_007949552.1
Strain : Actinoplanes sp. N902-109
Genome accession: NC_021191
Putative virulence/resistance : Virulence
Product : ABC transporter permease protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1703472 - 1704530 bp
Length : 1059 bp
Strand : +
Note : -

DNA sequence :
ATGGTCCTGACCCGTCCACCGGCGCCGCCGCGACCGCAGCCGGCCGCAGCCGGGCTGGCCGGGACCGAGGCGAGACGGGC
GACCGGCCTGCTGCTGTGCGTGCTGCTGCTGGCCGTGGTGTGCCTGCTCAGCATCGCGCTCGGCACCCGGACCATCGCGC
TGCACACCGTCTGGGAGGCGTTCTTCCACCACGCCGACACCGACGACCAGTCGATCGTGCGGGACCTGCGGGTGCCCCGG
ACGATCCTGGGGCTGCTGGCCGGGGTCGCGTTCGGACTGTCCGGCGCGGTCATCCAGGCGGTCACCCGCAACCCGCTGGC
CGACACCCAGGTGCTGGGCATCAACTCCGGTGCCGCGCTGTTCGTCGTGCTCGCGGTCGGGGTGTTCGGGCTGACCAGCC
TCAGCCAGTACCTGTGGTTCGGCTTCGCTGGGGTCGCGGTGGCACTCACCCTGGTGTATCTGCTCGGGTCGGTGGGGCGG
GGCGGCGCCACCCCGGTGCGGTTGACACTGGCCGGCATCGCCCTTGGCGCGGTCATGGACGGGTTGTCCAGCGGCATCCG
GCTGGTGCGCCCGCGGGCGTTCGACTATCTGCGGTTCTGGGACATCGGGGCGCTCGGCGGCCGGCCGCTCGACGTGGCCA
CCACGATTCTGCCGTTCGTCCTGGCGGGCCTGGTGCTGGCGCTGTTCGTGGCGCGCGAGCTCAACGCCGTGGCGCTCGGC
GACGACCTGGCACGCACGCTCGGGGCGAGTGTCGGGCGCACCCGGCTGCTGGCCACGGTCTCGGTGATGCTGCTGACCGG
GGCCGCGACCGCCGCGGTCGGGCCGATCGGGTTCGTCGGGCTGATGGTGCCGCATGTGGTGCGCTGGATCGTCGGGCCGG
ACCAGCGCTGGATCTTCGCCTGGACCACGGTGCTCGGGCCGGTGCTGCTGCTGGTCGCCGACATCGTGGGCCGGCTGGTG
GTGCGCCCCGGCGAGCTGCGGGTGGGCGTGGTGACCGCGTTCGTCGGCGCACCGGTGCTGATCTGGTACGTCCGCCGGGG
CCGGGCGAGCGGCCGATGA

Protein sequence :
MVLTRPPAPPRPQPAAAGLAGTEARRATGLLLCVLLLAVVCLLSIALGTRTIALHTVWEAFFHHADTDDQSIVRDLRVPR
TILGLLAGVAFGLSGAVIQAVTRNPLADTQVLGINSGAALFVVLAVGVFGLTSLSQYLWFGFAGVAVALTLVYLLGSVGR
GGATPVRLTLAGIALGAVMDGLSSGIRLVRPRAFDYLRFWDIGALGGRPLDVATTILPFVLAGLVLALFVARELNAVALG
DDLARTLGASVGRTRLLATVSVMLLTGAATAAVGPIGFVGLMVPHVVRWIVGPDQRWIFAWTTVLGPVLLLVADIVGRLV
VRPGELRVGVVTAFVGAPVLIWYVRRGRASGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagA YP_005680309.1 hypothetical protein Not tested PiCp 1 Protein 2e-37 46
fagA YP_005682399.1 hypothetical protein Virulence PiCp 1 Protein 2e-37 46
fagA YP_003782432.1 integral membrane protein Virulence PiCp 1 Protein 2e-37 46
fagA YP_005684490.1 hypothetical protein Not tested PiCp 1 Protein 2e-37 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fepD YP_007949552.1 ABC transporter permease protein VFG0926 Protein 5e-46 50