Gene Information

Name : Desgi_0993 (Desgi_0993)
Accession : YP_007944209.1
Strain : Desulfotomaculum gibsoniae DSM 7213
Genome accession: NC_021184
Putative virulence/resistance : Resistance
Product : D-alanyl-D-alanine dipeptidase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1018562 - 1019329 bp
Length : 768 bp
Strand : +
Note : PFAM: D-ala-D-ala dipeptidase

DNA sequence :
TTGAAATCAATCAATAAGTTTTACGCAGTTAGCATAGCATTACTGATCCTGCTCTTTGCGGTAATAGGATGTAATAATAC
TATCAACACAAAAAGTGCCGGCAGTAATATTGCTGTAAGTACGCACAGTGCTGAAAATACTTCAGAGCCTGATAGGAGCC
TTCCCCAGGGGTTCGTGTACTTAGATGAAGTTATACCGGATGCGGTATACGATATCAGATATTATGGTGAACATAATTTT
GTAGGCAGGCAAATCGACGGGTTCCTGGCTCCCAGGGCAATTATAACGGCACCGGCAGCGGAAGCACTGAAAAAGGTGCA
GGAAGACTTAAAAGAACAAGGGTTAGGCTTAAAAATATACGATGCATACCGCCCCACACAAGCAGTAGATCACTTTGTGA
GGTGGGCTCAAAACGCCGATGATACTGAGATGAAGGAAGAGTTTTACCCCAACATAGAAAAAAGCAACCTGTTTGCACAG
GGTTACATCGCCAAAAGGTCAGGACACTCACGGGGTAGTACGGTTGACTTAACCATTATAATGTTGGACACCAAAAAAGA
ACTTGATATGGGGAGCGCTTTTGATTTATTGGATCCAATTTCCCATCATGATACCACGTTGATTACTGATGAACAGCGGG
AAAACCGCAGGCTGCTGAGGCATGTCATGGAGGAGAACGGTTTTAGAGCATACTACAAAGAATGGTGGCATTATACTCTA
ATCAACGAACCCTATCCCGAAAAGTATTTTAATTTTCCTGTGCAATAG

Protein sequence :
MKSINKFYAVSIALLILLFAVIGCNNTINTKSAGSNIAVSTHSAENTSEPDRSLPQGFVYLDEVIPDAVYDIRYYGEHNF
VGRQIDGFLAPRAIITAPAAEALKKVQEDLKEQGLGLKIYDAYRPTQAVDHFVRWAQNADDTEMKEEFYPNIEKSNLFAQ
GYIAKRSGHSRGSTVDLTIIMLDTKKELDMGSAFDLLDPISHHDTTLITDEQRENRRLLRHVMEENGFRAYYKEWWHYTL
INEPYPEKYFNFPVQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vanXB YP_008394260.1 D-alanyl-D-alanine dipeptidase Not tested Not named Protein 2e-44 48
vanX NP_815950.1 D-alanyl-D-alanine dipeptidase Not tested Not named Protein 1e-44 47

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desgi_0993 YP_007944209.1 D-alanyl-D-alanine dipeptidase FJ349556.1.orf5.gene Protein 2e-45 49
Desgi_0993 YP_007944209.1 D-alanyl-D-alanine dipeptidase AF310956.2.orf6.gene Protein 7e-45 48
Desgi_0993 YP_007944209.1 D-alanyl-D-alanine dipeptidase AE016830.1.gene2249. Protein 5e-45 47
Desgi_0993 YP_007944209.1 D-alanyl-D-alanine dipeptidase U35369.1.gene7.p01 Protein 8e-45 47
Desgi_0993 YP_007944209.1 D-alanyl-D-alanine dipeptidase U82965.2.orf32.gene. Protein 2e-47 46
Desgi_0993 YP_007944209.1 D-alanyl-D-alanine dipeptidase M97297.gene.p01 Protein 7e-44 45
Desgi_0993 YP_007944209.1 D-alanyl-D-alanine dipeptidase NC_014475.1.orf4.gen Protein 7e-44 45
Desgi_0993 YP_007944209.1 D-alanyl-D-alanine dipeptidase NC_005054.2598281.p0 Protein 7e-44 45
Desgi_0993 YP_007944209.1 D-alanyl-D-alanine dipeptidase AF130997.1.orf5.gene Protein 2e-42 43
Desgi_0993 YP_007944209.1 D-alanyl-D-alanine dipeptidase AF155139.2.orf6.gene Protein 5e-41 43