Gene Information

Name : Desgi_4747 (Desgi_4747)
Accession : YP_007947642.1
Strain : Desulfotomaculum gibsoniae DSM 7213
Genome accession: NC_021184
Putative virulence/resistance : Unknown
Product : single-stranded DNA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4842416 - 4842838 bp
Length : 423 bp
Strand : -
Note : PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb)

DNA sequence :
ATGTTAAATAAGGTTATTTTAATCGGCAGACTAACCCGGGATCCTGAGCTGCGTCATACAGCCAGTGGTATGCCGGTGGC
AAGTTTTTCATTGGCTATGAATCGGCAGTTTACTAACCGGCAGGGTGAAAGAGTAGATGAAACTGATTATATTGATATTG
TGGTGTGGCAAAAATTGGCCGAAACTTGTGCTAACTACTTGGGCAAGGGACGGTTGGTAGCAGTGGAAGGAAGACTGCAG
TCGCGCTCTTATGAAGATAAACAGGGTATACGCCGTAAAGTGGTCGAGGTTGTAGCTAGTGATGTGCGTTTCTTAGATTC
AGCCAGGGATGCCCGTGGTTCGGTTACCGGTGGAAATAAAACCGCCGAAGGTGAGCGTTTTGCCAGCGAGATCAGCTTTA
ACGAGGAGGATATTCCGTTTTAG

Protein sequence :
MLNKVILIGRLTRDPELRHTASGMPVASFSLAMNRQFTNRQGERVDETDYIDIVVWQKLAETCANYLGKGRLVAVEGRLQ
SRSYEDKQGIRRKVVEVVASDVRFLDSARDARGSVTGGNKTAEGERFASEISFNEEDIPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAOV_0290 YP_005735807.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa1 Protein 5e-28 58
SAV0864 NP_371388.1 ssDNA-binding protein Not tested ¥ÕSa1 Protein 1e-27 58
SAOV_1081 YP_005736576.1 ssDNA-binding protein Not tested ¥ÕSa2 Protein 1e-27 58
SAOV_1956c YP_005737400.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa3 Protein 4e-25 57
SEQ_0802 YP_002746140.1 single-strand binding protein Not tested ¥ÕSeq2 Protein 2e-20 49
SH1792 YP_253707.1 single strand DNA binding protein Not tested ¥ÕSh1 Protein 5e-27 48
SAV1983 NP_372507.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 1e-28 47
SAKOR_01963 YP_008492151.1 Single-strand DNA binding protein Not tested ¥ÕSa3 Protein 3e-28 47
SAUSA300_1958 YP_494609.1 single-strand binding protein Not tested ¥ÕSa3 Protein 2e-28 47
SAUSA300_1958 YP_494609.1 single-strand binding protein Not tested ¥ÕSa3 Protein 2e-28 47
ef0030 AAM75236.1 EF0030 Not tested Not named Protein 8e-17 45
ssb-3 NP_814291.1 single-strand binding protein Not tested Not named Protein 1e-16 45
ef0020 AAM75226.1 EF0020 Not tested Not named Protein 2e-23 41
ssb-2 NP_814280.1 single-strand binding protein Not tested Not named Protein 3e-23 41