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Name : Desgi_4410 (Desgi_4410) Accession : YP_007947327.1 Strain : Desulfotomaculum gibsoniae DSM 7213 Genome accession: NC_021184 Putative virulence/resistance : Unknown Product : Retron-type reverse transcriptase Function : - COG functional category : - COG ID : - EC number : - Position : 4499866 - 4501686 bp Length : 1821 bp Strand : + Note : PFAM: Reverse transcriptase (RNA-dependent DNA polymerase) DNA sequence : ATGACGACCAAGAGACTTAAGAAGAGGCAAAAACTTAGAAACAACGAGTACTACGACATCCAAGAGAAGTTTGATGACCT TTATCGACGCTCGAAGCAAGGTTCGACATTCAACAATCTCGTTGAACTAATAGCCAGTGACCAAAATATCTTACTCGCAT ATAGGAACATCAAGAAGAACAAGGGTAGCAAAACCAGAGGTTCCAACCGCACCACAATTATCGACATAGGCAAAACGAAT CCTGACAGACTGCTACAGTATGTCAAGAACAGGCTTCAGAATTACTCGCCACAGCCGATAAGGCGGAAGGAGATAGAAAA AGAAGATGGTAGGATGCGACCGCTTGGTATTCCAACTATAGAAGACCGCCTAATACAGCAGTGTATCAAGCAGGTATTAG AACCCATTTGTGAGGCAAAATTCTATGAGCACAGCTACGGCTTCAGACCCAACAGGGGGACACACCACGCAATAGCGAGA GTGAACTTCCTAGCATATAAGTCTAAGCTACAATACGTAGTCGATATAGATATCAAAGGATTTTTTGACAACGTAGACCA TGCCAAGCTCATGAAGCAGATGTGGAGTATAGGAATTCAAGACAAGAATTTGCTTTGCATTATTTCTAAGATGCTCAAAG CAGAAATTAAGGGAATTGGAATTCCAACCAGAGGAACACCCCAGGGGGGGATTCTTAGTCCACTGCTTTCGAATATTGTC CTAAACGAATTGGATTGGTGGATAGCTAGCCAATGGGAAACTATGCCGACGAAGCACCAATATGCGAGCAAGAGCAAGAG GGTTCGTGCCCTCAAGACAGCAGGATTAAAGGAAGTCTACATCGTGAGGTATGCGGATGACTTCAAACTGCTATGCAGGA CTAGGAAAGAAGCTGAAAAGTTGTTCTGCGCAGTTAAAAAATGGCTAAACGAGAGATTAAAGTTGGAGATAAGCCCGGAG AAATCAAAGATAGTGAATCTAAAGAGACACTATTCTGATTTTCTTGGGGTGAGGATTAAGCTTCAGGAGAAAGGGCAACA ACAAGTCACAACCTCCCGAATGACAGAGAGATCGGTTCGGAAGAGTAAGGACAAGTTGAAGAACTGTGTTGACACTCTGC AGAGGCAGCCCACCGTAGACAACATGCAGAAACTTAATGCCTGTATATTAGGCCTGCATAATTACTACTGTGTGGCAACA AACGTAAGCAGAGATTTCGACAAAATCGCCTTTCATGTCGACGCGAACCTTAGAAATACGAGGTCTATGACAACTCGACG AGGACAACTAACCAAAGCTTTTACCCAGTTTTATGGGCATTATACTGGGCGCCCGAAGTTTATAATGGGCATACCCCTAT TCCCCATACACTTGGTAAAGTTCAAGCCACCTCCATATTTTAACCAGGACAAGTGCAATTACACGCTAGAAGGGCGGAAT ATGATACACAAACCTCTTCAAGCCATTGACACATCGGTATTGCGCTATCTCATGGAGCACCCTGTGGAACAGGAAAGCAC AGAGTACAACGATAATAGAATATCCTTGTACGTGAGCCAACGGGGTAAATGTTTCATCACTGGCTTAGAGCTTACGACAT TCACCGCAGAGGCTCACCGCAAAACCCCAAAAGGGAACGGCGGAACCGACGAATATGGAAACTTGGTTATTGTAGTCCCG GAAGTGCATAGGCTGATACATGCCTTGGACGAGGAGACTGTTCAGAAATGTCTGTTAGCACTGACGAACAGCAATATAAA TTATAAACGCCTCAATCAACTAAGGAAAATGGTTGGAAATAGTGAAATTTGTGTGGGGTAG Protein sequence : MTTKRLKKRQKLRNNEYYDIQEKFDDLYRRSKQGSTFNNLVELIASDQNILLAYRNIKKNKGSKTRGSNRTTIIDIGKTN PDRLLQYVKNRLQNYSPQPIRRKEIEKEDGRMRPLGIPTIEDRLIQQCIKQVLEPICEAKFYEHSYGFRPNRGTHHAIAR VNFLAYKSKLQYVVDIDIKGFFDNVDHAKLMKQMWSIGIQDKNLLCIISKMLKAEIKGIGIPTRGTPQGGILSPLLSNIV LNELDWWIASQWETMPTKHQYASKSKRVRALKTAGLKEVYIVRYADDFKLLCRTRKEAEKLFCAVKKWLNERLKLEISPE KSKIVNLKRHYSDFLGVRIKLQEKGQQQVTTSRMTERSVRKSKDKLKNCVDTLQRQPTVDNMQKLNACILGLHNYYCVAT NVSRDFDKIAFHVDANLRNTRSMTTRRGQLTKAFTQFYGHYTGRPKFIMGIPLFPIHLVKFKPPPYFNQDKCNYTLEGRN MIHKPLQAIDTSVLRYLMEHPVEQESTEYNDNRISLYVSQRGKCFITGLELTTFTAEAHRKTPKGNGGTDEYGNLVIVVP EVHRLIHALDEETVQKCLLALTNSNINYKRLNQLRKMVGNSEICVG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EF2326 | NP_815981.1 | group II intron reverse transcriptase maturase | Not tested | Not named | Protein | 3e-131 | 48 |
