Gene Information

Name : Desgi_4288 (Desgi_4288)
Accession : YP_007947207.1
Strain : Desulfotomaculum gibsoniae DSM 7213
Genome accession: NC_021184
Putative virulence/resistance : Unknown
Product : SsrA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4372366 - 4372824 bp
Length : 459 bp
Strand : -
Note : PFAM: SmpB protein; TIGRFAM: SsrA-binding protein

DNA sequence :
ATGTCGGCCAAAGCCATAGTTAACCGCAAGGCACGCCATGAATATCATATTGATGAAACCTACGAGGCCGGTATTGCCCT
GTCTGGTACGGAAATTAAGTCCATCCGAGCCGGCAAGGCCAATTTGCAGGACAGCTATGCCCGGATTGAAAATGGCGAAC
TGGTGTTGTATAATATGCATATCAGTCCTTATGAACAGGGCAACCGGTTTAATCACGAGCCCAAGCGGCCGCGCAAGTTA
CTGATGCACAAGCGAGAAATCATGCGATTGTACGGTCAGACCAGGGAAAAAGGTCTTTCTCTAATTCCCCTTAAGGTATA
TTTTAAAAATGGTAAGTGGGCTAAAATCGAGCTGGCTCTGGCAAGGGGCAAAAAGAAGTTTGACAAGCGGGAAGACATCG
CGGCCCGGGACGCCAAAAGGGAAATGGACCGGGCTATGAAGGACCGGCAGAGGCAGTAG

Protein sequence :
MSAKAIVNRKARHEYHIDETYEAGIALSGTEIKSIRAGKANLQDSYARIENGELVLYNMHISPYEQGNRFNHEPKRPRKL
LMHKREIMRLYGQTREKGLSLIPLKVYFKNGKWAKIELALARGKKKFDKREDIAARDAKREMDRAMKDRQRQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AET14351.1 SsrA-binding protein Not tested SaPI68111 Protein 1e-39 62
smpB YP_001800894.1 SsrA-binding protein Not tested Not named Protein 2e-32 53
smpB NP_230495.1 SsrA-binding protein Not tested VPI-1 Protein 5e-25 42