Gene Information

Name : Desgi_3937 (Desgi_3937)
Accession : YP_007946900.1
Strain : Desulfotomaculum gibsoniae DSM 7213
Genome accession: NC_021184
Putative virulence/resistance : Unknown
Product : DNA replication protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3997590 - 3998327 bp
Length : 738 bp
Strand : +
Note : PFAM: IstB-like ATP binding protein

DNA sequence :
ATGAGCCAGAGCCCATGTGAATCCGAGATTACCCGGTTGGCCCACAAGATGAAATTGAACATATTAGAAAACTACAAAAA
GCATGTGAAAACCGATAGTAGCTTTGAGGAGAACCTATTGACCTTGCTTCGTCTGGAAAATGAACAGCGTGACAAGGCGC
TCGTCCGACGTCGGATTAAACAAGCTGGTTTTCCTGTTATTAAAACCCTCGACACCTTTGAATTTAACCAGACTATGCTG
CCCCATCTTAAACAGGAGCAGGTGCTGGAATTATCGCTGTGCGAGTTTATCCGCAACCGTACCAATGTAGTTGCCATAGG
CAACTCGGGAACTGGAAAAACGCACATTGCAACCGCTCTTGGTATGGAGGCTATCCGGAAAGGTTACTCCGTGCGATTCC
GACGTGCCTGTGATTTAGCAACCCAGTTGGCGGAAGCTCAGTCAGAGAAACATCTATCCCGCATGCTTAAAACTCTTCAT
CATTGTCAGCTTCTCATCGTGGACGAGCTTGGATATATGACGCTGGATCAGAAAAACTCCAACTTACTGTTCCAGGTGCT
GGCCGGTCGATACGAGGTACGAAGTACTATTGTTACCAGCAATCTCGAATTTTCCAAGTGGCCGGAATTCATAGGTGATC
CAATCATGGCGACTGCGCTGGTGGACAGGCTAGTGCATCGTTCAGCTATCCTTAATATGAATGGTGAGGGATATCGGCTG
AATAACCCAAAACGATGA

Protein sequence :
MSQSPCESEITRLAHKMKLNILENYKKHVKTDSSFEENLLTLLRLENEQRDKALVRRRIKQAGFPVIKTLDTFEFNQTML
PHLKQEQVLELSLCEFIRNRTNVVAIGNSGTGKTHIATALGMEAIRKGYSVRFRRACDLATQLAEAQSEKHLSRMLKTLH
HCQLLIVDELGYMTLDQKNSNLLFQVLAGRYEVRSTIVTSNLEFSKWPEFIGDPIMATALVDRLVHRSAILNMNGEGYRL
NNPKR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
y1094 CAD33719.1 ORF B protein Not tested PAI I 536 Protein 3e-30 42
y1093 CAD66188.1 transposase Orf B, insertion element IS100 Not tested PAI III 536 Protein 7e-32 41
unnamed CAB46598.1 IS100 transposase Not tested HPI Protein 5e-32 41
s0036 CAD33774.1 ORF B protein Not tested PAI I 536 Protein 5e-32 41
y1093 CAD42087.1 OrfB protein of IS100 transposase Not tested PAI II 536 Protein 5e-32 41
orfB CAE85183.1 OrfB protein, transposase, IS100 Not tested PAI V 536 Protein 5e-32 41
YPTB1586 YP_070114.1 transposase/IS protein Not tested HPI Protein 7e-32 41
api84 CAF28558.1 putative transposase Not tested YAPI Protein 5e-32 41
unnamed CAA21402.1 - Not tested HPI Protein 7e-32 41
y1093 CAC43411.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 5e-32 41
YPO1901 YP_002346891.1 transposase/IS protein Not tested HPI Protein 8e-32 41
y2410 NP_669717.1 transposase/IS protein Not tested HPI Protein 8e-32 41
aec58 AAW51741.1 Aec58 Not tested AGI-3 Protein 6e-32 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desgi_3937 YP_007946900.1 DNA replication protein VFG1460 Protein 2e-30 42
Desgi_3937 YP_007946900.1 DNA replication protein VFG1663 Protein 4e-32 41
Desgi_3937 YP_007946900.1 DNA replication protein VFG1627 Protein 3e-32 41
Desgi_3937 YP_007946900.1 DNA replication protein VFG1606 Protein 3e-32 41
Desgi_3937 YP_007946900.1 DNA replication protein VFG1515 Protein 3e-32 41