Gene Information

Name : Desgi_3881 (Desgi_3881)
Accession : YP_007946864.1
Strain : Desulfotomaculum gibsoniae DSM 7213
Genome accession: NC_021184
Putative virulence/resistance : Unknown
Product : pyridoxal 5''-phosphate synthase, synthase subunit Pdx1
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3936586 - 3937470 bp
Length : 885 bp
Strand : -
Note : PFAM: SOR/SNZ family; TIGRFAM: pyridoxal 5'-phosphate synthase, synthase subunit Pdx1

DNA sequence :
ATGGTCGAAAAAGGAACCTGGACTGTTAAAAAAGGCATGGCGGAAATGCTAAAGGGTGGAGTGATTATGGATGTCACAAC
CCCAGAGCAGGCTAAGATAGCGGAAGATGCGGGTGCTTGCGCCGTGATGGCCCTGGAGCGTGTCCCGGCGGATATCCGGG
CTGCCGGGGGAGTAGCCAGAATGGCAGACCCCACCATCATCCAGCGGATAATGGGTGCTGTAACTATCCCGGTCATGGCG
AAAGCGCGTATCGGCCACTTTGTCGAAGCGCAGATCCTAGAGTCTCTGGGCGTGGATTATATTGACGAAAGTGAAGTGCT
GACCCCGGCAGATGAAACCCACCATATCAACAAACATGCCTATAGAGTGCCCTTTGTTTGCGGTGCCAGAAATCTGGGTG
AGGCGTTAAGGAGGATCAGCGAGGGAGCGGCAATGATCCGGACCAAGGGAGAGCCCGGCACCGGCAACGTTGTAGAAGCC
GCCAGGCATATGCGGATGGTAATGGGTGAAATCCGCAGGGTTCAGCATTTGCCCAAAGAGGAACTTATGTCTGCGGCCAA
GGAAATGGGTGCGCCGTACGATCTGCTAGCGCAGGTTGCCGAAATGGGTCGCCTGCCCGTGGTGAACTTCGCCGCAGGGG
GTATTGCCACTCCAGCAGACGCCGCGTTCATGATGCAACTGGGTTGCGACGGCATCTTTGTGGGGTCCGGCATATTCAAG
TCCAATAACCCAACTGCCCGGGCCAAGGCCATTGTGGCCGCCACCACCCATTACAACGACCCGCAAATCCTGACAGAGGT
ATCCAAGGATCTGGGCGAAGCCATGCCCGGCCTGGAGATAGCCACAATTTTGCCAGAGCAAAGGATGCAGGACCGCGGGT
GGTAG

Protein sequence :
MVEKGTWTVKKGMAEMLKGGVIMDVTTPEQAKIAEDAGACAVMALERVPADIRAAGGVARMADPTIIQRIMGAVTIPVMA
KARIGHFVEAQILESLGVDYIDESEVLTPADETHHINKHAYRVPFVCGARNLGEALRRISEGAAMIRTKGEPGTGNVVEA
ARHMRMVMGEIRRVQHLPKEELMSAAKEMGAPYDLLAQVAEMGRLPVVNFAAGGIATPADAAFMMQLGCDGIFVGSGIFK
SNNPTARAKAIVAATTHYNDPQILTEVSKDLGEAMPGLEIATILPEQRMQDRGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 4e-88 69
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 4e-88 69
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 5e-88 68