Gene Information

Name : Desgi_2866 (Desgi_2866)
Accession : YP_007945943.1
Strain : Desulfotomaculum gibsoniae DSM 7213
Genome accession: NC_021184
Putative virulence/resistance : Resistance
Product : ABC-type antimicrobial peptide transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2922520 - 2923362 bp
Length : 843 bp
Strand : -
Note : PFAM: ABC transporter

DNA sequence :
ATGATGATTCAAGTGTCCGATTTAACTAAAATATACAGCACCGGGGCGCAACCGGTGGCGGCGTTAAAAGACGTGAACCT
CGAAGTCAAGGGCGGCGAGTTTGTATCCATAATGGGGCCGTCCGGTTCCGGCAAGTCAACTTTGATGAACCTCCTGGGCT
GTCTGGATACTCCCACCTCCGGCTCATATAAACTGGACGGCATTGAAATAAGCACTCTTGATGATACCGGCATGGCCAGG
GTGCGCAACCGGAAAATAGGCTTTGTTTTTCAAAACTTTAACCTGCTGCCCCGGATGACCGCCCTGCGCAATGTGGAACT
GCCCATGTTGTATGCCGGGATAGATGCCCGGGAAAGAGTGAAGAGAGCCACCTCTGCCCTTCAGCGGGTGGGGCTGGCCG
ACCGACTCAACCACCGTCCCAACCAGATATCCGGAGGCCAGGTGCAAAGGGTGGCCATAGCCCGGGCTTTGGTCAACCAA
CCGGCGGTACTGCTGGCCGATGAGCCTACGGGCAACCTGGATACTCGCTCCGGGGAAGAAATCATGGCAATTTTTCAGGA
TTTAAACCGGGGCGGAGCCACCATAGTGCTGGTCACCCACGAGCGGGATATTGCCCTGCACACCTCAAGGATTATCCACT
TCAGGGACGGCAGGCTGGTGGCCGACGAAAAGGTGGAAACCCCTCTGGATGCTGTAGAACAGTTAAGAAATCTGGGGCCG
GGGGAAGAAAACGAAAGCCGGGCCGGGGAAAAGTCCGCCTCTAGCGTATTTCTGTCTCCTGAGACAATCCCTCATGCACA
AACGGTATCCGACTCTGATACCGGGAGGGGGGAAACTCAGTGA

Protein sequence :
MMIQVSDLTKIYSTGAQPVAALKDVNLEVKGGEFVSIMGPSGSGKSTLMNLLGCLDTPTSGSYKLDGIEISTLDDTGMAR
VRNRKIGFVFQNFNLLPRMTALRNVELPMLYAGIDARERVKRATSALQRVGLADRLNHRPNQISGGQVQRVAIARALVNQ
PAVLLADEPTGNLDTRSGEEIMAIFQDLNRGGATIVLVTHERDIALHTSRIIHFRDGRLVADEKVETPLDAVEQLRNLGP
GEENESRAGEKSASSVFLSPETIPHAQTVSDSDTGRGETQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-35 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-32 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-33 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-33 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desgi_2866 YP_007945943.1 ABC-type antimicrobial peptide transport system, ATPase component NC_012469.1.7686878. Protein 1e-58 55
Desgi_2866 YP_007945943.1 ABC-type antimicrobial peptide transport system, ATPase component NC_008702.1.4606598. Protein 1e-48 49
Desgi_2866 YP_007945943.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene798.p Protein 6e-41 46
Desgi_2866 YP_007945943.1 ABC-type antimicrobial peptide transport system, ATPase component NC_012469.1.7685735. Protein 3e-34 43
Desgi_2866 YP_007945943.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene598.p Protein 3e-38 41