Gene Information

Name : Desgi_2823 (Desgi_2823)
Accession : YP_007945900.1
Strain : Desulfotomaculum gibsoniae DSM 7213
Genome accession: NC_021184
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2862969 - 2864081 bp
Length : 1113 bp
Strand : -
Note : PFAM: RibD C-terminal domain; Cytidine and deoxycytidylate deaminase zinc-binding region; TIGRFAM: riboflavin-specific deaminase C-terminal domain; riboflavin biosynthesis protein RibD

DNA sequence :
TTGAACGCCGGAGATCAACATTATATGCAGATGGCTTTGGAGCTGGCGGCCAGGGCTATGGGACGCACTACCCCCAATCC
CATGGTAGGTGCCGTGGTGGTTAAAGATGGCCATGTGGTAGGTAGAGGTTATCATGCCCGTGCAGGTACTCCGCATGCTG
AGGTGCATGCATTGAGGGAAGCGGGTGACCTTGCCGGGGGAGCTGTTTTATATGTTACACTGGAGCCCTGCTGTCACCAC
GGCCGCACCGGACCATGCACCGATGCGATTATTAAAGCACAGATCGGACGGGTGGTGCTGGCCATGACCGATCCCAACCC
GCTGGTGGCAGGTAAGGGTATCCAAAAGTTAACAGAAGCCGGCGTGCATGTAGACTGTGGCGTGCTTGAGGAAGATGCCC
GTCGACTAAACGAAGTGTTCATTAAGTATATCACCACCCGTTTGCCTTACGTGGTTATGAAAACCGCCATGAGCCTGGAC
GGTAAAATAGCCACTGCTAAAGGGGAGTCCCAGTGGATTACCGGTAATGCGGCCAGGGAATTTGTTCACAGGCTGCGGGA
TAGGTATGATGCTATTTTAGTGGGTGTGGGTACAGTGCTGGCTGATGACCCATCCCTTACTACCAGGTTACCGGAGGGTG
GCGGTAAAGATCCGGTCAGGATAATACTTGATTCCAAGGCGAGGACACCGGAAACGGCCCGGGTGATCACCCAGTCGTCG
GAAGCCCCCACAATTATTGTTACCACGCCCGGAGCACCGCCCGAGAGGGTGCGGCTGCTAAGGGAAGCCGGTGCCCGGGT
ACTGGAAGTGACCGGTGGCGAAGGCGGTATTGATCTGGGGGTCTTACTGCATGAACTGGGGCGGCGTGAGATTACCGGTG
TACTGGTGGAAGGGGGTGCCCGGGTCAACGGTTCGTTTATTACATGTAATTTGGTGGATAAAGTTAACTGGTTTATAGCT
CCCAAGTTAATCGGAGGTGAAAGTGCACCAGGTCCGGTAGGCGACCCGGGTATAACCGCTTTGCAGGATGCGCTGCCAAT
AAAAGATATTAAGTTGCATCGTTATGGGGAAGATATTTGTGTAGAAGGTTACGCAGTTAAACGGAGTGATTGA

Protein sequence :
MNAGDQHYMQMALELAARAMGRTTPNPMVGAVVVKDGHVVGRGYHARAGTPHAEVHALREAGDLAGGAVLYVTLEPCCHH
GRTGPCTDAIIKAQIGRVVLAMTDPNPLVAGKGIQKLTEAGVHVDCGVLEEDARRLNEVFIKYITTRLPYVVMKTAMSLD
GKIATAKGESQWITGNAAREFVHRLRDRYDAILVGVGTVLADDPSLTTRLPEGGGKDPVRIILDSKARTPETARVITQSS
EAPTIIVTTPGAPPERVRLLREAGARVLEVTGGEGGIDLGVLLHELGRREITGVLVEGGARVNGSFITCNLVDKVNWFIA
PKLIGGESAPGPVGDPGITALQDALPIKDIKLHRYGEDICVEGYAVKRSD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 4e-45 42
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 4e-45 42