|
Name : Desgi_2659 (Desgi_2659) Accession : YP_007945740.1 Strain : Desulfotomaculum gibsoniae DSM 7213 Genome accession: NC_021184 Putative virulence/resistance : Virulence Product : type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB Function : - COG functional category : - COG ID : - EC number : - Position : 2692474 - 2694132 bp Length : 1659 bp Strand : - Note : PFAM: Type II/IV secretion system protein; GSPII_E N-terminal domain DNA sequence : TTGGGCACCTGTCTGGTCAAAGAAGGCGTGATTAGCCAGGAGCAGCTGGATCAAGCGCTGGAAAAACAAAAAGCAAGCCC AAACAAAGAAGATAGTCTGAGTAAAATACTGGTCAGAGACGGGCATTGCACCGAAGATGATATTGCCAGGGTAACCGCCA AAAGGGCGGGTGGTTCTTATATTACCCTGGATAGTATAACTATTGATCCCGCTGCCGTGGCAACAATGCCTGTGACGGCT TTTAAAAAATATAAAGCTCTGCCCGTAGCCTTTGACGGGGACAAGCTTGTGGTGGCCATGAAGTACCCTGATAATATCGT GGCCATTGATGACTTACAGATTATGACCGGCTTTGATATCAAGCCCGTAGTGGTACCTGATAGTGAGCTGGAGGCGGCCA TCGAAAAATACAGCCGGGTGGGCCTGGATTTTGAGTATCTAAATGATGAAGAGCAGCAGGAAGAAAATATTAATATCGAA ACCGATGACCAGACTTCCAGGCCGGCCGTACAAATCGCCCACATGATCCTGGACCAGGCTGTAGGCTCCAGGGCCAGCGA TATACATATCGAACCTTACGAAACTTACCTGCGGGTGCGTTTCCGGATTGACGGGGTGATGCACGATATGATGCAGCTGC CCCGTAAAATACACGCGTCGCTGGTATCACGAATTAAAATTATGGCCAGCATGAATATCGCGGAACGGCGCATACCCCAG GACGGGCGCATGTCCCTGACAATAGAAGGTAAGCCCATTGACGCCCGGGTAGCCTCGCTGCCGGCCAGTTTTGGCGAACG CCTGACCCTGCGGCTGTTGGATCGCTCGGCCAAAATCATCAGCCTGGAAGAACTGGGTATGGCTCCCGAGATGCTGCGCA GGTATCGACAGGTCTTAGACCTGCCTTATGGCTGTATACTGGCCACCGGTCCGACGGGCAGCGGCAAGAGCACTACGCTG TTTGCCAGTCTGGCTACTTTGGACAAGGTGGCCAAGAATGTCATAACCGTGGAGGATCCCGTGGAATACCGGATGGAAAG CGTAAACCAGGTGCAAATCAACACCAGGGCCGGCCTGACCTTTGCCTCGGGACTTCGTTCCATACTACGCAGCGACCCGG ATATCATCATGGTGGGGGAAATCAGGGACCAGGAAACAGCCAAACTGGCTATTGAATCAGCCCTAACGGGCCACCTGGTT TTTTCCACCCTGCATACCAACGACGCGGCGGGGGCTGTAAGCCGCCTTACGGAAATGGGCATTGAACCTTTCTTGACTTC ATCTGCACTGGCATGTGTACTGGCCCAGCGTCTGGCCAGGGTGCTGTGTCCCAACTGCAAGGAACCTTATGAGATAGACC GGAGGCAGTTGGAAAGGGTATCCGGTTTTCCACTGGCCGAAAATGAAACCAGGGTAAAGTTATACCGCCCGGTAGGCTGC ATGCGCTGCGGCAATACCGGCTTTAAAGGCCGGATAGGTATATATGAGCTGCTTTTTAACACCGAAACAATCCAGAAGAT GGCGTTGGAGCGCAAATCAGCCAGCGATATTAAAAAGGCGGCCATCGCCGAAGGCATGGTGACACTGCGCCAAGACGGCC TGGATAAAGTTAAAAAGGGGATTACATCCTTGGAAGAGATAATGAGGGTGATCGTATGA Protein sequence : MGTCLVKEGVISQEQLDQALEKQKASPNKEDSLSKILVRDGHCTEDDIARVTAKRAGGSYITLDSITIDPAAVATMPVTA FKKYKALPVAFDGDKLVVAMKYPDNIVAIDDLQIMTGFDIKPVVVPDSELEAAIEKYSRVGLDFEYLNDEEQQEENINIE TDDQTSRPAVQIAHMILDQAVGSRASDIHIEPYETYLRVRFRIDGVMHDMMQLPRKIHASLVSRIKIMASMNIAERRIPQ DGRMSLTIEGKPIDARVASLPASFGERLTLRLLDRSAKIISLEELGMAPEMLRRYRQVLDLPYGCILATGPTGSGKSTTL FASLATLDKVAKNVITVEDPVEYRMESVNQVQINTRAGLTFASGLRSILRSDPDIIMVGEIRDQETAKLAIESALTGHLV FSTLHTNDAAGAVSRLTEMGIEPFLTSSALACVLAQRLARVLCPNCKEPYEIDRRQLERVSGFPLAENETRVKLYRPVGC MRCGNTGFKGRIGIYELLFNTETIQKMALERKSASDIKKAAIAEGMVTLRQDGLDKVKKGITSLEEIMRVIV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 1e-92 | 47 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-92 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Desgi_2659 | YP_007945740.1 | type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB | VFG0182 | Protein | 7e-89 | 48 |
| Desgi_2659 | YP_007945740.1 | type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB | VFG1876 | Protein | 3e-87 | 47 |
| Desgi_2659 | YP_007945740.1 | type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB | VFG2048 | Protein | 7e-93 | 46 |
| Desgi_2659 | YP_007945740.1 | type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB | VFG0233 | Protein | 3e-83 | 46 |
