Gene Information

Name : Desgi_2439 (Desgi_2439)
Accession : YP_007945527.1
Strain : Desulfotomaculum gibsoniae DSM 7213
Genome accession: NC_021184
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2474189 - 2475940 bp
Length : 1752 bp
Strand : -
Note : PFAM: Pyruvate kinase, barrel domain; PEP-utilising enzyme, mobile domain; Pyruvate kinase, alpha/beta domain; TIGRFAM: pyruvate kinase

DNA sequence :
ATGCGGCGCACCAAAATAGTATGCACTATTGGACCGACCAGTGAGAGCATAACTATATTGGAGCAATTAATGCTGGCCGG
TATGAATGTAGCCAGGCTGAACTTTTCCCACGGTACCCATGATGATCATGCCCGCCGGCTGGCAGCCGTACGTAAAGCCG
CCGGTAATGTGGGCAAAAATATAGCCATTTTACTTGATACCAAGGGGCCTGAGATACGGCTGGGTTATCTGGAAAAGGAT
TTTGTGCGGCTTAAAACCGGCGATAGTATTACCCTGACCACCGAGACAATTAAAGGCAATGAGAGGATTCTTCCCGTCAG
CTACCGGGGATTGCCCAAAGACGTTAAACCCAATGACCGGATATTAATATCCGATGGATTGATTGCCTTGCGGGTGAATA
GCATAGCCGGAGAGAAAATTAATTGTACCGTGGAAAACGGCGGTGAGATTACCAGTCAAAAAGGGGTTAATGTCCCCGAT
GTTTATGTAAAAATGCCGGCCATCACTGAACAAGATGAGCGTGATATTATTTTTGGCATAGAAAATAACTTTGACTTTGT
AGCCGCTTCTTTTGTGCGCCGGGCTAACGATATACTAATTATTCGTAAAATCATTGAAGATAACGGCGGCCAAATGGATA
TAATTTCCAAAATTGAGAACCGGGAGGCCGTCAATAAGCTAGATGAAATAATTGAAGTGTCTGATGGTATAATGGTGGCC
CGAGGTGACCTGGGTGTGGAGATCCCTCCGGAGGAAGTGCCGTTGATTCAAAAAACCATCATTGATAAATGTAAGCAAGC
AGGCAAGCCAGTGATTACAGCTACTCAAATGCTGGAATCAATGATTCAAAACCCGCGTCCCACCAGGGCCGAAGCCAGTG
ATGTGGCCAACGCCATTTTGGACGGTACCGATGCGGTGATGCTTTCCGGTGAGACCGCTGCCGGCAAATACCCTGTGGAA
GCAGTGGAAACTATGGCCCGTATTGCCGCCCGGGCTGAATCAGCAATTAAATTTGATGAATTGCTGAAAAACAGGCGCCG
GGTGCTATCTAAAACCGTTACCGACGCCATCAGCCATGCTACCGTGTCTACTGCTCTGGACTTGGGAGCCGCGGCTATTA
TCACTTCCACGGAATCAGGCTATACTGCTAAAATGGTTAGTAAGTACAGGCCCCAGGCACCAATCATTGCTGTTACCCCC
AAGAGGACGGTACTGCGTAAAATGGCGCTGGTCTGGGGGGTGCAGCCGCTGCTGGTAGGTCGCACTGAGGATACAGACAG
CATGATCTCTGCGGCTGTGGAAGTTTCTCTGGCTGCCGGGCTGATCAAAGCCGGGGATTTAATAGTTATCACCGCGGGCG
TGCCCGTGGGGGTGCATGGCACCACCAATCTTGTTAAGGTACATACCGTGGGTGAAATCATAGCTAAAGGCACGGGGATC
ATTAAACGGTCGGTGACCGGCAAGGCATGTGTGGCCGATAGTGCTCGTGAGGCGATGGAGAAGATGGAGGATGGTAGTGT
ACTGGTAACCCATGACACAGATCGCGATTTTATTCCGGCTATTGAAAAGGCTGCAGCTCTAATTACTGAGACGGGCGGGT
TAACTTCCCATGCCGCCATCGTTGGCCTGGAGTTCGGCATACCGGTGATTGTGGGGGTGGAGGAGGCTACCAGGATAATC
CCCGACGGGGAAGTGGTAACTGTGGATGGTCAGCGGGGTCTGGTATATAGAGGCACGGCAAAGGTTTTATAA

Protein sequence :
MRRTKIVCTIGPTSESITILEQLMLAGMNVARLNFSHGTHDDHARRLAAVRKAAGNVGKNIAILLDTKGPEIRLGYLEKD
FVRLKTGDSITLTTETIKGNERILPVSYRGLPKDVKPNDRILISDGLIALRVNSIAGEKINCTVENGGEITSQKGVNVPD
VYVKMPAITEQDERDIIFGIENNFDFVAASFVRRANDILIIRKIIEDNGGQMDIISKIENREAVNKLDEIIEVSDGIMVA
RGDLGVEIPPEEVPLIQKTIIDKCKQAGKPVITATQMLESMIQNPRPTRAEASDVANAILDGTDAVMLSGETAAGKYPVE
AVETMARIAARAESAIKFDELLKNRRRVLSKTVTDAISHATVSTALDLGAAAIITSTESGYTAKMVSKYRPQAPIIAVTP
KRTVLRKMALVWGVQPLLVGRTEDTDSMISAAVEVSLAAGLIKAGDLIVITAGVPVGVHGTTNLVKVHTVGEIIAKGTGI
IKRSVTGKACVADSAREAMEKMEDGSVLVTHDTDRDFIPAIEKAAALITETGGLTSHAAIVGLEFGIPVIVGVEEATRII
PDGEVVTVDGQRGLVYRGTAKVL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 1e-100 49
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 9e-101 49
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 6e-101 49
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 6e-101 49
pykA NP_273151.1 pyruvate kinase Not tested IHT-A Protein 7e-59 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desgi_2439 YP_007945527.1 pyruvate kinase VFG0479 Protein 2e-101 49