Gene Information

Name : Desgi_2319 (Desgi_2319)
Accession : YP_007945414.1
Strain : Desulfotomaculum gibsoniae DSM 7213
Genome accession: NC_021184
Putative virulence/resistance : Virulence
Product : response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2342902 - 2343579 bp
Length : 678 bp
Strand : -
Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal

DNA sequence :
TTGAAAATACTGGTTATCGACGATGATAAAAAAATTACCAGCATGATGCAAAGGGTGCTTACCTTTGAAGGTCATGAAGC
GTTTATTGCGTATAACGGTGAAGAAGGGCTGCACCAGGCTGATGAATGTAAGCCGGACCTGGTAATACTGGACATTATGA
TGCCGGGTATGGACGGCTGGGAGGTGTGCCGGAGGTTACGGATGCACAGTGATGTGCCCATTTTGATGCTCACCGCTCGG
GACGAGGTGGCGGACCGGGTGCGGGGTTTGGACGTAGGTGCCGATGACTACCTGGTGAAACCATTTGCGCTGGAGGAACT
GCTGGCCCGGGTCAGGGCATTATTGCGCCGGGTGCGCCGGCTTGGCCAGGGTAACGGGCTAGTGCTGAACTTTGCGGATT
TAACGCTGGATCTAGAAATAAGGGAGGCCCGGCGGGGCGGCGAGGTAATATCCCTGACCACCCGGGAATATGAGCTGCTC
AAGCTTTTTATGCAACACCCCCGCCAGGTACTTACCCGGAACCAGATCATGGAACAAATCTGGGGCTATGATTTTTCCGG
GGAATCCAACGTGCTGGAGGTTTACATCGGCAGCCTGCGCCAGAAGCTGGAGCACCCGCAAGCACCCAAGCTGCTCCATA
CCGTGCGGGGTGTAGGTTATACTTTGAGGGAGCAGTGA

Protein sequence :
MKILVIDDDKKITSMMQRVLTFEGHEAFIAYNGEEGLHQADECKPDLVILDIMMPGMDGWEVCRRLRMHSDVPILMLTAR
DEVADRVRGLDVGADDYLVKPFALEELLARVRALLRRVRRLGQGNGLVLNFADLTLDLEIREARRGGEVISLTTREYELL
KLFMQHPRQVLTRNQIMEQIWGYDFSGESNVLEVYIGSLRQKLEHPQAPKLLHTVRGVGYTLREQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-32 43
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 9e-32 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desgi_2319 YP_007945414.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0083 Protein 5e-37 50
Desgi_2319 YP_007945414.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0125 Protein 9e-40 47
Desgi_2319 YP_007945414.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain HE999704.1.gene1528. Protein 1e-38 46
Desgi_2319 YP_007945414.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0111 Protein 8e-36 45
Desgi_2319 YP_007945414.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0197 Protein 6e-40 45
Desgi_2319 YP_007945414.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0308 Protein 6e-34 44
Desgi_2319 YP_007945414.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0347 Protein 2e-32 43
Desgi_2319 YP_007945414.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AE000516.2.gene3505. Protein 1e-37 43
Desgi_2319 YP_007945414.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AE015929.1.gene1106. Protein 1e-27 42
Desgi_2319 YP_007945414.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0638 Protein 8e-29 42
Desgi_2319 YP_007945414.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002951.3238224.p0 Protein 3e-34 41
Desgi_2319 YP_007945414.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007793.3914065.p0 Protein 3e-34 41
Desgi_2319 YP_007945414.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002758.1121390.p0 Protein 3e-34 41
Desgi_2319 YP_007945414.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_010079.5776364.p0 Protein 3e-34 41
Desgi_2319 YP_007945414.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002952.2859858.p0 Protein 3e-34 41
Desgi_2319 YP_007945414.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007622.3794948.p0 Protein 3e-34 41
Desgi_2319 YP_007945414.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_003923.1003417.p0 Protein 3e-34 41
Desgi_2319 YP_007945414.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_013450.8614146.p0 Protein 3e-34 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desgi_2319 YP_007945414.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1390 Protein 7e-50 54
Desgi_2319 YP_007945414.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1389 Protein 3e-40 49
Desgi_2319 YP_007945414.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1386 Protein 2e-43 46
Desgi_2319 YP_007945414.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG0596 Protein 5e-33 43