Gene Information

Name : Desgi_2086 (Desgi_2086)
Accession : YP_007945196.1
Strain : Desulfotomaculum gibsoniae DSM 7213
Genome accession: NC_021184
Putative virulence/resistance : Resistance
Product : ABC-type antimicrobial peptide transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2132392 - 2133075 bp
Length : 684 bp
Strand : -
Note : PFAM: ABC transporter

DNA sequence :
TTGGAGATTCTAAGGACTGAGAATTTATCAAAAACTTATGGAAAAGGCGAAACAAAGGTGGAAGCCTTAAAGGATGTGTC
CTTTTCTGTTTCCAAAGGTGAATTTGTTTCCATTGTTGGACCGTCGGGCTCGGGGAAAAGTACACTCTTAAATCTGCTTG
GAGCATTGGACATGCCAACATCGGGCAAGGTCTTTATAGATGGCCGGGATGTTTTTAATATGCAGGAAGAGGCGCTGGCG
GTATTTCGCAGGCGTAATATAGGATTCATTTTTCAAGCATATAATCTTGTTCCTGAATTAAATGTTGAGGAAAATATAAT
CTTGCCATTACTGTTGGATCATAAAAAACCAGATCAGCAATATATTGACGAATTGCTTTTTACACTGGGATTGACGGAAA
GAAAGCACCACCTGCCCAGTCAACTTTCAGGAGGACAGCAGCAGCGTGTGGCTATTGGACGCGCCCTTGCAGCCAAGCCT
GCAATCATTTTGGCCGACGAGCCAACGGGAAACCTTGATAGTAAAAACAGCAGAGATGTAATTGACCTGATGAAGTTGTC
TGTGGAAAGGTATCAGCAGACCCTGATTATGATTACGCACAATGAGAACTATGCTTCTTTTGCAGACAGAGTCTTTCAAG
TTAAGGATGGAGTGGTCACCGAGCTTGGAGGTGGCCAAAGATGA

Protein sequence :
MEILRTENLSKTYGKGETKVEALKDVSFSVSKGEFVSIVGPSGSGKSTLLNLLGALDMPTSGKVFIDGRDVFNMQEEALA
VFRRRNIGFIFQAYNLVPELNVEENIILPLLLDHKKPDQQYIDELLFTLGLTERKHHLPSQLSGGQQQRVAIGRALAAKP
AIILADEPTGNLDSKNSRDVIDLMKLSVERYQQTLIMITHNENYASFADRVFQVKDGVVTELGGGQR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-39 46
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-39 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-39 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-39 44
unnamed AAP55232.1 unknown Not tested SaPIbov2 Protein 1e-38 43
SARLGA251_00480 YP_005754062.1 ABC-type transport system ATPase Not tested Type-XI SCCmec Protein 7e-35 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desgi_2086 YP_007945196.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene798.p Protein 9e-75 67
Desgi_2086 YP_007945196.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene598.p Protein 3e-58 57
Desgi_2086 YP_007945196.1 ABC-type antimicrobial peptide transport system, ATPase component NC_012469.1.7686878. Protein 3e-44 45
Desgi_2086 YP_007945196.1 ABC-type antimicrobial peptide transport system, ATPase component NC_008702.1.4606598. Protein 4e-35 44
Desgi_2086 YP_007945196.1 ABC-type antimicrobial peptide transport system, ATPase component NC_012469.1.7685735. Protein 4e-37 42