Gene Information

Name : Desgi_0209 (Desgi_0209)
Accession : YP_007943487.1
Strain : Desulfotomaculum gibsoniae DSM 7213
Genome accession: NC_021184
Putative virulence/resistance : Resistance
Product : ABC-type antimicrobial peptide transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 178494 - 179192 bp
Length : 699 bp
Strand : +
Note : PFAM: ABC transporter

DNA sequence : 
ATGATCATGCTGGAAACTAAAGCCTTGAAAAAGATCTACGGGGGCGGCAGTAACATGGTAAGAGCTGTGAACGGGGTTAA
CTTATCAGTAGAAGAAGGTGAGTTTTTGGCCATTATCGGCAGCTCTGGTTCAGGCAAAACCACGCTATTACATATGATGG
GCGGATTGGATCGACCTAGCGAAGGAAAGGTTTTCATTGATAATAAAGAAATATATACCATGAGTGACGATCACTTGGCT
ATATTCAGGCGGCGCAAGGTTGGTTTTGTTTTTCAATCATATAATCTCATCCCGGTGCTTAATGTCTGGGAAAATATATG
TTTACCCATGGAACTGGATGCCAAAGCAGTAGATAGGGATTTTATAGCTGGCCTGATGGAGAGTCTGAATATTTATGACA
AGCGAAAAGCATTGCCAAATCAGCTTTCCGGCGGACAGCAGCAACGGGTAGCTATTGCCAGAGCCTTGGCGACCCGGCCA
TCCATCATTTTGGCCGATGAGCCTACCGGAAATCTTGATTCCAAAACCAGTCTGGAAGTGGTAAATCTATTAAAACAGTC
GGTAAAGAAATACCATCAAACCCTGGTCATGATCACCCATAATGAAACTTTAGCCCGGATGGCTGATCGCATCGTAAGGA
TTGAGGATGGGAAATTCACTTGTCAGGGGGGAGTAGCTTGCAAACCTATATCAGAATAG

Protein sequence : 
MIMLETKALKKIYGGGSNMVRAVNGVNLSVEEGEFLAIIGSSGSGKTTLLHMMGGLDRPSEGKVFIDNKEIYTMSDDHLA
IFRRRKVGFVFQSYNLIPVLNVWENICLPMELDAKAVDRDFIAGLMESLNIYDKRKALPNQLSGGQQQRVAIARALATRP
SIILADEPTGNLDSKTSLEVVNLLKQSVKKYHQTLVMITHNETLARMADRIVRIEDGKFTCQGGVACKPISE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-34 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-35 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 5e-35 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-35 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desgi_0209 YP_007943487.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene598.p Protein 1e-66 60
Desgi_0209 YP_007943487.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene798.p Protein 1e-62 56
Desgi_0209 YP_007943487.1 ABC-type antimicrobial peptide transport system, ATPase component NC_008702.1.4606598. Protein 3e-33 41