|
Name : Desgi_1749 (Desgi_1749) Accession : YP_007944883.1 Strain : Desulfotomaculum gibsoniae DSM 7213 Genome accession: NC_021184 Putative virulence/resistance : Resistance Product : D-alanine--D-alanine ligase Function : - COG functional category : - COG ID : - EC number : - Position : 1787424 - 1788479 bp Length : 1056 bp Strand : + Note : PFAM: D-ala D-ala ligase C-terminus; D-ala D-ala ligase N-terminus; TIGRFAM: D-alanine--D-alanine ligase DNA sequence : ATGAAAAATGAAAAAAACAAAGTTGCCGTTTTATTCGGCGGATGCTCTACAGAGTATGAGGTTTCTCTCCAATCCGCCTA TTCTGTAATAACGAACCTAAATCCAAATAAGTATGAAACCATATTGATTGGAATCACTCGGCAGGGAGCTTGGTTGAGAT ATTATGGCTCACTTGAAAAAATTCAGAATGACACATGGATGGATAGCAACGATTGTGTCCCAGCAATCATTTCACCTGAT CGGAATATTCACGGACTGCTCGAATTTCGTGGTAATAAAGTGATTGCAACCAGAATTGATGTGGCGTTTCCTGTTCTGCA TGGAAAAAACGGCGAGGACGGAACATTACAGGGATTATTAACGATAGCTGGTATTCCTTTTGCAGGGTGTGGTACGCTTT GTTCTGCAATGTGCATGGACAAGGACATCGCTCACAAAATAGCAAATCTGGCCGGTATCAAAACACCTCCGTCCGTCGTG CTGCGGTCCGGATTTACCGATGCCGAACTGATGAAGCAGATTAGCTACCTAACATTTCCTCTGTTTGTTAAACCGGCAAA CGCCGGTTCCTCATTTGGTATTACAAAGGTTTTGCAAAAGGATGAGCTTTCCGATGCAGTCACCGTTGCTTTTCAACATG ACAATAAGGTCATCATAGAGGAAGCCGTCGACGGTTTTGAGGTTGGCTGTGCCGTCCTTGGCAATGATTCGCTTGCCATC GGTGAGGTTGACGAAATAGAGCTGTCTCATGGGTTCTTTGATTACACGGAGAAATATACCCTGAAAACCTCTAAAATCCA TATGCCTGCCCGCATTGATCCAGATACAGCCGAGCGTATTAAACAGACGGCTTCCGTCATTTACCGGGCGCTCGATTGCT CGGGATTTGCAAGGGTTGATTTGTTTCTGACACCGGAAAAAGAAATCATCTTCAACGAAGTAAATACAATTCCCGGTTTT ACCTCTCACAGCCGCTATCCCAATATGCTAAAAGGCATTGGAATGACATTCGGGCAGATTGTGGATGCAGCGATAAGTCT GGCGACAAACTCATGA Protein sequence : MKNEKNKVAVLFGGCSTEYEVSLQSAYSVITNLNPNKYETILIGITRQGAWLRYYGSLEKIQNDTWMDSNDCVPAIISPD RNIHGLLEFRGNKVIATRIDVAFPVLHGKNGEDGTLQGLLTIAGIPFAGCGTLCSAMCMDKDIAHKIANLAGIKTPPSVV LRSGFTDAELMKQISYLTFPLFVKPANAGSSFGITKVLQKDELSDAVTVAFQHDNKVIIEEAVDGFEVGCAVLGNDSLAI GEVDEIELSHGFFDYTEKYTLKTSKIHMPARIDPDTAERIKQTASVIYRALDCSGFARVDLFLTPEKEIIFNEVNTIPGF TSHSRYPNMLKGIGMTFGQIVDAAISLATNS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| vanB | NP_815951.1 | D-alanine--D-lactate ligase | Not tested | Not named | Protein | 5e-68 | 47 |
| vanB | YP_008394259.1 | Vancomycin B-type resistance protein vanB, D-alanine--D-lactate ligase | Not tested | Not named | Protein | 1e-68 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Desgi_1749 | YP_007944883.1 | D-alanine--D-alanine ligase | U00456.gene.p01 | Protein | 3e-68 | 47 |
| Desgi_1749 | YP_007944883.1 | D-alanine--D-alanine ligase | U35369.1.gene6.p01 | Protein | 3e-68 | 47 |
| Desgi_1749 | YP_007944883.1 | D-alanine--D-alanine ligase | AE016830.1.gene2250. | Protein | 3e-68 | 47 |
| Desgi_1749 | YP_007944883.1 | D-alanine--D-alanine ligase | AF277571.gene.p01 | Protein | 5e-67 | 47 |
| Desgi_1749 | YP_007944883.1 | D-alanine--D-alanine ligase | AY489045.gene.p01 | Protein | 2e-65 | 47 |
| Desgi_1749 | YP_007944883.1 | D-alanine--D-alanine ligase | AF310956.2.orf5.gene | Protein | 7e-69 | 46 |
| Desgi_1749 | YP_007944883.1 | D-alanine--D-alanine ligase | AY145441.gene.p01 | Protein | 3e-69 | 46 |
| Desgi_1749 | YP_007944883.1 | D-alanine--D-alanine ligase | NC_014475.1.orf3.gen | Protein | 3e-65 | 44 |
| Desgi_1749 | YP_007944883.1 | D-alanine--D-alanine ligase | NC_005054.2598280.p0 | Protein | 3e-65 | 44 |
| Desgi_1749 | YP_007944883.1 | D-alanine--D-alanine ligase | AF130997.1.orf4.gene | Protein | 6e-63 | 44 |
| Desgi_1749 | YP_007944883.1 | D-alanine--D-alanine ligase | AF162694.gene.p01 | Protein | 9e-69 | 43 |
