|
Name : Desgi_0017 (Desgi_0017) Accession : YP_007943318.1 Strain : Desulfotomaculum gibsoniae DSM 7213 Genome accession: NC_021184 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : - Position : 19778 - 21046 bp Length : 1269 bp Strand : + Note : PFAM: tRNA synthetase class II core domain (G, H, P, S and T); Seryl-tRNA synthetase N-terminal domain; TIGRFAM: seryl-tRNA synthetase DNA sequence : ATGCTGGATTTGAAATTTGTGCGGAATAACCCGGAAATTGTTAAAGAGGCACTACAGAAAAGAGGAGCTAGCATTTCACT CGACCCGTTTTTGGAACTCGATGAGCGCCGCAGGGAAAAGCTGGTTGAGGTGGAGAAGCTTAAAAATAAACGTAATGTGG TATCCGAGGAGATTGGCCGGTTGAAAAAGGCCGGACAGTTGGCTGAGGATATGGTACTGGAAATGCGGCAGGTTTCCAAT GCTATCAAGGATTTAGATGAAGAAATTCGTATTTTGGATCAGCAGCTGCAACAAACATTGCTAAATATCCCCAATATTCC TGAAGAGAGTGTACCCGTGGGGTTGGATGAAAATGACAATGTTGAATTGCGGCGCTGGGGTGAGCCCAGACAGTTTGGTT TTGAGCCCAAACCCCACTGGGATATCGGTGAGGCGCTGGATATATTGGATTTTGAACGGGGCGGCAAGGTTACAGGTGCC AGGTTTCTTTTTTACAAAGGAGCCGGTGCGGCTCTGGAGCGTGCTGTATTTAATTTTATGCTGGATGTGCATACGAGGGA GCACGGCTATGTAGAGGTAATGCCACCATTTATGGTTAACAGCAACAGTATGATCGGCACAGGCCAACTGCCCAAGTTTG CCGAGGATATGTTTAAAGTTGAAAATACTGATTACTATCTAATACCCACTGCCGAAGTGCCGGTAACCAATCTTTATAAT AATGAAATATTGGATGGCGATAGATTGCCCATTTACCATTGTGCCTACAGCGCTTGCTTTAGAGCCGAGGCAGGAGCGGC GGGACGTGATACACGGGGCCTTATTAGGCTGCACCAGTTTAACAAGGTAGAACTGGTAAAGTTCGTTCGTCCGGAGGAGT CCTTTACTGAACTGGAGAAATTGACTCAAAATGCCGAGAAAATACTGCAATTGTTGGAGCTGCCTTACCGGGTGGTTGTT TTAAGTACCGGTGACCTGGGTTTTAGCTCTGCCAAAACCTATGATTTAGAGGTGTGGCTACCCAGTTATAACAGTTATAA AGAGATTTCTTCTTGCAGTAATTTTGTGGATTTCCAGGCCCGGCGGGCCAATATCAGGTACCGGGAGGGTAAAGCAAAAC CTCGTTTTGTACACACTTTAAACGGTTCAGGTTTGGCCGTGGGCCGGACGGTAGCCGCTATATTGGAAAATTGTCAGACT GATACCGGTGCGGTGAAAATACCGGCGGTGTTACAGCCGTATATGGGTGGCATTAAAGAGATAAATTGA Protein sequence : MLDLKFVRNNPEIVKEALQKRGASISLDPFLELDERRREKLVEVEKLKNKRNVVSEEIGRLKKAGQLAEDMVLEMRQVSN AIKDLDEEIRILDQQLQQTLLNIPNIPEESVPVGLDENDNVELRRWGEPRQFGFEPKPHWDIGEALDILDFERGGKVTGA RFLFYKGAGAALERAVFNFMLDVHTREHGYVEVMPPFMVNSNSMIGTGQLPKFAEDMFKVENTDYYLIPTAEVPVTNLYN NEILDGDRLPIYHCAYSACFRAEAGAAGRDTRGLIRLHQFNKVELVKFVRPEESFTELEKLTQNAEKILQLLELPYRVVV LSTGDLGFSSAKTYDLEVWLPSYNSYKEISSCSNFVDFQARRANIRYREGKAKPRFVHTLNGSGLAVGRTVAAILENCQT DTGAVKIPAVLQPYMGGIKEIN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 1e-120 | 63 |
