Gene Information

Name : Desgi_1565 (Desgi_1565)
Accession : YP_007944723.1
Strain : Desulfotomaculum gibsoniae DSM 7213
Genome accession: NC_021184
Putative virulence/resistance : Virulence
Product : response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1591625 - 1592320 bp
Length : 696 bp
Strand : +
Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal

DNA sequence :
ATGCCGTATAAGGTATTAGTTGTTGATGATGAAGAATCGATAGTCAGGTTGGTAACATTTAATCTGGAAAAAGAAGGTTT
CCATACACTGGTAGCAAACAACGGCAACGAAGCGCTTTCCAAGATTCATGCTGAACAGCCTGATTTAGTAATTTTAGACT
TAATGCTCCCGGGACTTGACGGTCTTGAAGTATGCCGGCTTGTGCGCCGGGAGGGATTACCTGTAGCCGTGATTATGTTA
ACTGCAAAGGACCAGGAAATAGATCGTGTGCTGGGCTTGGAACTGGGAGCGGACGACTATATCACCAAGCCCTTTAGCCC
CCGGGAACTGGTTGCACGGGTTAAAGCGGTCTTGAGGAGAACATCTACCCGTGAAGAAATACGCCAGCCAAGTGAAAGGA
TAAAAATTGGAACCTTGAACATAGATTCTGAGAGACACGAGGTAAAGGTCAACGGAAAGCAAGTGGAACTTACGCCCAAG
GAATTTGAGCTGCTTGAATTTTTGGCCAGGAATGCAGGCAAGGTAATGACCAGGGACGTATTGCTTAACCATATCTGGGA
TTATACATATGATGGAGATACCAGGATTGTGGATGTACATGTTAGTCACCTGCGCGAAAAAATTGAAGCCAACCCCAAAA
GCCCTGTTTACATCAAAACCGTGCGGGGCGTGGGTTACAAGTTCCATGAAGAATAG

Protein sequence :
MPYKVLVVDDEESIVRLVTFNLEKEGFHTLVANNGNEALSKIHAEQPDLVILDLMLPGLDGLEVCRLVRREGLPVAVIML
TAKDQEIDRVLGLELGADDYITKPFSPRELVARVKAVLRRTSTREEIRQPSERIKIGTLNIDSERHEVKVNGKQVELTPK
EFELLEFLARNAGKVMTRDVLLNHIWDYTYDGDTRIVDVHVSHLREKIEANPKSPVYIKTVRGVGYKFHEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 1e-43 43
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 3e-43 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desgi_1565 YP_007944723.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002952.2859905.p0 Protein 3e-62 58
Desgi_1565 YP_007944723.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007793.3914279.p0 Protein 2e-62 58
Desgi_1565 YP_007944723.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007622.3794472.p0 Protein 3e-62 58
Desgi_1565 YP_007944723.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002745.1124361.p0 Protein 2e-62 58
Desgi_1565 YP_007944723.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_009782.5559369.p0 Protein 2e-62 58
Desgi_1565 YP_007944723.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002951.3237708.p0 Protein 2e-62 58
Desgi_1565 YP_007944723.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_003923.1003749.p0 Protein 2e-62 58
Desgi_1565 YP_007944723.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002758.1121668.p0 Protein 2e-62 58
Desgi_1565 YP_007944723.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_009641.5332272.p0 Protein 2e-62 58
Desgi_1565 YP_007944723.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_013450.8614421.p0 Protein 2e-62 58
Desgi_1565 YP_007944723.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain HE999704.1.gene2815. Protein 4e-61 55
Desgi_1565 YP_007944723.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_012469.1.7685629. Protein 4e-54 53
Desgi_1565 YP_007944723.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_012469.1.7686381. Protein 7e-59 52
Desgi_1565 YP_007944723.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AE016830.1.gene1681. Protein 7e-61 51
Desgi_1565 YP_007944723.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AE000516.2.gene3505. Protein 5e-49 51
Desgi_1565 YP_007944723.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_014475.1.orf0.gen Protein 3e-44 44
Desgi_1565 YP_007944723.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_005054.2598277.p0 Protein 3e-44 44
Desgi_1565 YP_007944723.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain HE999704.1.gene1528. Protein 1e-36 44
Desgi_1565 YP_007944723.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AM180355.1.gene1830. Protein 8e-42 43
Desgi_1565 YP_007944723.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002695.1.916589.p Protein 4e-42 43
Desgi_1565 YP_007944723.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP001138.1.gene2239. Protein 2e-41 43
Desgi_1565 YP_007944723.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP000647.1.gene2531. Protein 1e-41 43
Desgi_1565 YP_007944723.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0039 Protein 6e-42 43
Desgi_1565 YP_007944723.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0596 Protein 2e-41 43
Desgi_1565 YP_007944723.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP000034.1.gene2186. Protein 6e-42 43
Desgi_1565 YP_007944723.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AE015929.1.gene1106. Protein 2e-38 42
Desgi_1565 YP_007944723.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_011595.7057856.p0 Protein 2e-39 42
Desgi_1565 YP_007944723.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_010410.6002989.p0 Protein 2e-39 42
Desgi_1565 YP_007944723.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_010400.5986590.p0 Protein 2e-39 42
Desgi_1565 YP_007944723.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0308 Protein 2e-36 42
Desgi_1565 YP_007944723.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AF155139.2.orf0.gene Protein 8e-42 42
Desgi_1565 YP_007944723.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_009085.4919120.p0 Protein 3e-26 42
Desgi_1565 YP_007944723.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP001918.1.gene3444. Protein 2e-40 42
Desgi_1565 YP_007944723.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP000675.2.gene1535. Protein 9e-41 41
Desgi_1565 YP_007944723.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0083 Protein 2e-37 41
Desgi_1565 YP_007944723.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain FJ349556.1.orf0.gene Protein 3e-41 41
Desgi_1565 YP_007944723.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0638 Protein 7e-31 41
Desgi_1565 YP_007944723.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP001485.1.gene721.p Protein 1e-33 41
Desgi_1565 YP_007944723.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AF130997.1.orf0.gene Protein 2e-37 41
Desgi_1565 YP_007944723.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AF162694.1.orf4.gene Protein 1e-37 41
Desgi_1565 YP_007944723.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0197 Protein 7e-34 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desgi_1565 YP_007944723.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1389 Protein 3e-35 44
Desgi_1565 YP_007944723.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1563 Protein 6e-44 43
Desgi_1565 YP_007944723.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1386 Protein 1e-43 43
Desgi_1565 YP_007944723.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1702 Protein 1e-43 42