Gene Information

Name : Desgi_1562 (Desgi_1562)
Accession : YP_007944720.1
Strain : Desulfotomaculum gibsoniae DSM 7213
Genome accession: NC_021184
Putative virulence/resistance : Resistance
Product : ABC-type antimicrobial peptide transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1589251 - 1589919 bp
Length : 669 bp
Strand : +
Note : PFAM: ABC transporter

DNA sequence :

TTGGAGCCGGATGTGTTGATCTCTGGGAAAAACTTGACCAGGGTTTACGGGAAGAATAAGCTTGCGGTTAAAGTTTTGGA
CGTGAAAAGCTTGGAGATCCGGAGGGGTGAATTTATCGCGCTGACTGGTCCTTCCGGGTGCGGTAAAACCACCTTGCTAA
ACCTTTTAGGTGTCCTGGACAGGCCCAGCGGTGGAGATATTATTTTTGAAGGAAAAAAGATTTCTGAACGGGATGAGGCT
TTCCTTTGTAGATTTCGTCGGCAGAGGATCGGCTTTATTTTTCAGGCCTATCATTTGATTCCTACTATCAGCGCTTTAAA
GAATGTAATGGTGCCTGCCTTCCCTTTGGGGAGCGGCAGATACAAGAGGCGTGCAATGGAACTGATCAGGCAGGTGGGCC
TAGCGGGAAAGGAAGGGCGCAGGCCGGATGATCTTTCCGGTGGTGAGCAACAGCGGGTGGCCATTGCCCGAGCTCTTCTG
CTGGATCCGGATCTGATCCTGGCTGACGAACCCACGGGCAATTTGGACTCGGCTACCGGGGCGGAAATTATGGATTTGCT
GAAAACATTGAACCAAAAGGGTAAAACAGTGCTGGTGGCCACCCACGACCAGCGGGTGGCGGAAGGTTGTGGTAGGAATA
TAAGGATGATGGATGGGCAGATAATCTAG

Protein sequence :

MEPDVLISGKNLTRVYGKNKLAVKVLDVKSLEIRRGEFIALTGPSGCGKTTLLNLLGVLDRPSGGDIIFEGKKISERDEA
FLCRFRRQRIGFIFQAYHLIPTISALKNVMVPAFPLGSGRYKRRAMELIRQVGLAGKEGRRPDDLSGGEQQRVAIARALL
LDPDLILADEPTGNLDSATGAEIMDLLKTLNQKGKTVLVATHDQRVAEGCGRNIRMMDGQII

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
cur_1502	YP_001800896.1	cell division ATP-binding protein FtsE	Not tested	Not named	Protein	6e-17	44
Spaf_1862	YP_006310627.1	amino acid ABC transporter ATP-binding protein	Not tested	FWisland_2	Protein	9e-19	41

• Homologs from CARD and BacMet (resistance genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
Desgi_1562	YP_007944720.1	ABC-type antimicrobial peptide transport system, ATPase component	NC_012469.1.7686878.	Protein	6e-26	45
Desgi_1562	YP_007944720.1	ABC-type antimicrobial peptide transport system, ATPase component	NC_008702.1.4606598.	Protein	9e-20	44
Desgi_1562	YP_007944720.1	ABC-type antimicrobial peptide transport system, ATPase component	CP001581.1.gene598.p	Protein	1e-24	43
Desgi_1562	YP_007944720.1	ABC-type antimicrobial peptide transport system, ATPase component	CP001581.1.gene798.p	Protein	2e-22	41