Gene Information

Name : Desgi_1359 (Desgi_1359)
Accession : YP_007944541.1
Strain : Desulfotomaculum gibsoniae DSM 7213
Genome accession: NC_021184
Putative virulence/resistance : Resistance
Product : ABC-type antimicrobial peptide transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1382652 - 1383407 bp
Length : 756 bp
Strand : +
Note : PFAM: ABC transporter; manually curated

DNA sequence :

GTGTCCGGTAAAACAGCTATCATAATGGAAAACATTAAAAAAGTATATAACATGGGAGAAACGGAGCTTCATGCATTAAA
AGGGATTAGTTTAACTATTCAAAATGGAGAAATGGTTGCTATCATGGGTTCTTCCGGTTCGGGTAAGAGTACTCTACTAA
ATATTATGGGCTGTTTAGACAGGCCCACCGGAGGAACATATTACCTTGACGATGAAAATGTTTCCAAGTTAGATAAAAAT
CAGCTGGCTGCTATACGCAATAAGAGGATTGGTTTTGTATTTCAGGGTTTTAACTTATTGGGAAATGTATCTGTACTGGC
CAATATTCAATTGCCGATGATCTATGCCGGAGCAGCCAAGAAAGAAATGGTGGACAGAGCTAAAGATGCCCTGGCCTGGG
TTGGGTTGTCAAATTATATAAACCACAATCCCGGTCAAATGTCGGGTGGCCAGCAGCAAAGAGTGGCTATTGCCCGGGCA
CTGGTAAACAACCCTTCTTTAATACTTGCGGACGAACCCACAGGTGCTCTTGATTCAAAAACAAGCATAGAGATTATTTC
TATGATTCAGAGGCTCAATATAGAAAAAGGCATTACTGTGGTGATGGTTACCCATGAAAAAGATATTGCCCTTTATTGCC
GCCGCTTAATCAACGTCAAAGACGGTCAACTTATAGGCGATACCCCGGTATTAAATCAAAGAAATGCTGCTGAAGATCTG
TCGGCTTTTGCGGAGGAAAGGGGTGTTTTAAATTAA

Protein sequence :

MSGKTAIIMENIKKVYNMGETELHALKGISLTIQNGEMVAIMGSSGSGKSTLLNIMGCLDRPTGGTYYLDDENVSKLDKN
QLAAIRNKRIGFVFQGFNLLGNVSVLANIQLPMIYAGAAKKEMVDRAKDALAWVGLSNYINHNPGQMSGGQQQRVAIARA
LVNNPSLILADEPTGALDSKTSIEIISMIQRLNIEKGITVVMVTHEKDIALYCRRLINVKDGQLIGDTPVLNQRNAAEDL
SAFAEERGVLN

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
Cp1002_1464	YP_005681730.1	ABC transporter ATP-binding protein	Not tested	PiCp 5	Protein	1e-33	43
CpC231_1466	YP_005683828.1	ABC transporter ATP-binding protein	Not tested	PiCp 5	Protein	3e-34	41
cpfrc_01473	YP_003783873.1	hypothetical protein	Not tested	PiCp 5	Protein	3e-34	41
CpI19_1473	YP_005685914.1	ABC transporter ATP-binding protein	Not tested	PiCp 5	Protein	3e-34	41

• Homologs from CARD and BacMet (resistance genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
Desgi_1359	YP_007944541.1	ABC-type antimicrobial peptide transport system, ATPase component	NC_012469.1.7686878.	Protein	3e-53	52
Desgi_1359	YP_007944541.1	ABC-type antimicrobial peptide transport system, ATPase component	CP001581.1.gene798.p	Protein	3e-40	45
Desgi_1359	YP_007944541.1	ABC-type antimicrobial peptide transport system, ATPase component	NC_008702.1.4606598.	Protein	7e-41	45
Desgi_1359	YP_007944541.1	ABC-type antimicrobial peptide transport system, ATPase component	CP001581.1.gene598.p	Protein	4e-38	43