Gene Information

Name : Desgi_0013 (Desgi_0013)
Accession : YP_007943314.1
Strain : Desulfotomaculum gibsoniae DSM 7213
Genome accession: NC_021184
Putative virulence/resistance : Unknown
Product : pyridoxal 5''-phosphate synthase, synthase subunit Pdx1
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 14909 - 15805 bp
Length : 897 bp
Strand : +
Note : PFAM: SOR/SNZ family; TIGRFAM: pyridoxal 5'-phosphate synthase, synthase subunit Pdx1

DNA sequence :
ATGGCTGAAACCATGGCAGAAAAGGGGACATGGACAGTAAAGAAAGGTTTGGCGGAAATGCTTAAGGGCGGTGTAATCAT
GGATGTTACTACACCGGAGCAAGCCAAAATAGCTGAAGAAGCGGGTGCCTGTGCGGTTATGGCACTGGAAAGGGTGCCTG
CTGATATACGTGCCGCTGGTGGAGTAGCTAGAATGGCCGATCCCACTGTTATTATACGTATTATGGATGCGGTAACCATT
CCTGTAATGGCCAAAGCTAGAATCGGTCATTTTGTAGAAGCACAAATACTAGAAGCTTTGGGTGCTGATTATATAGACGA
AAGTGAAGTGCTTACACCGGCGGATGAACAGTATCACATAGAAAAACACGCTTTTAAAGTACCTTTCGTATGTGGTGCCC
GTAATCTAGGCGAAGCGCTCAGGCGTATTGCCGAAGGTGCAGCCATGATTCGTACCAAGGGCGAACCCGGCACGGGCAAT
GTGGTGGAAGCTGTCCGCCATATGCGTATGGTGATGGGTGAAATACGCAGGGTACAAAATTTACCCAAAGAAGAATTAAT
GAGTGTAGCCAAGGATATGGGTGCACCTTACGATTTACTTTTAGATGTAGCCAACAATGGTAGATTACCGGTGGTTAACT
TTGCCGCCGGTGGTATTGCGACTCCTGCGGATGCGGCTTTAATGATGCAGTTGGGTTGTGACGGTATTTTTGTTGGCTCA
GGGATATTTAAATCCAATGACCCGCAGTCCAGGGCCAAGGCCATTGTTGCCGCTACCACGCATTATAATGACCCGAAAAT
ACTGGCCGAAATTTCACGTGATCTTGGAGAAGCTATGCCCGGTCTCGAAATATCCACTATTGCACCGGAACAGCGTATGC
AAGACAGAGGTTGGTAA

Protein sequence :
MAETMAEKGTWTVKKGLAEMLKGGVIMDVTTPEQAKIAEEAGACAVMALERVPADIRAAGGVARMADPTVIIRIMDAVTI
PVMAKARIGHFVEAQILEALGADYIDESEVLTPADEQYHIEKHAFKVPFVCGARNLGEALRRIAEGAAMIRTKGEPGTGN
VVEAVRHMRMVMGEIRRVQNLPKEELMSVAKDMGAPYDLLLDVANNGRLPVVNFAAGGIATPADAALMMQLGCDGIFVGS
GIFKSNDPQSRAKAIVAATTHYNDPKILAEISRDLGEAMPGLEISTIAPEQRMQDRGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 1e-88 68
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 2e-88 68
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 2e-88 67