Gene Information

Name : Desgi_1120 (Desgi_1120)
Accession : YP_007944321.1
Strain : Desulfotomaculum gibsoniae DSM 7213
Genome accession: NC_021184
Putative virulence/resistance : Virulence
Product : Fe-S-cluster-containing hydrogenase subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1141992 - 1142603 bp
Length : 612 bp
Strand : -
Note : PFAM: 4Fe-4S binding domain

DNA sequence : 
ATGGCAAGGCTTGGCATGGTCATTGACCTGAAACGCTGCGTTGGCTGTAATGCTTGCACTGTGGCCTGTAAATCGGAGAA
CGGAACACCACCGGATATTTTTTTCACCAGGGTTCTTGAGCAAGTAGCCGGACAGTACCCAATTGTCAAAAAGAAATATA
TTCCTGTACTCTGCAACCACTGTCTTGATGCACCCTGCGTAAGGGTTTGTCCCACAGGGGCAACTTATAAACGAGAGAAC
GGCATTGTATTGGTTGATTATACTAAATGCATCGGCTGCAAAGCTTGCGTGGTAGCCTGCCCGTATAACAACCGCACTTT
AATGCCCAAGGGAAAACTAAAAGAAGGACATTTTAAAAATCACCTAACCCCATATGAACAAGTTAAGTACAAAGATTTCT
ATGAAGGAGTGGTGGTAAAATGTACATTTTGCTATCATAGAGTAGACCAGGGACTGGAACCAGCATGTGTTAACACCTGC
CCGGCTGGAGCCAGAGTGTTTGGTGACCTGCATGACCCCGAAAGTGAAGTCAGCCGGTTAATCCGGCAGCGCGGTGGCAT
GCAGCCCATGTCCGAAGCGAATACTAATCCTTCAGTATATTATCTTGAATAG

Protein sequence : 
MARLGMVIDLKRCVGCNACTVACKSENGTPPDIFFTRVLEQVAGQYPIVKKKYIPVLCNHCLDAPCVRVCPTGATYKREN
GIVLVDYTKCIGCKACVVACPYNNRTLMPKGKLKEGHFKNHLTPYEQVKYKDFYEGVVVKCTFCYHRVDQGLEPACVNTC
PAGARVFGDLHDPESEVSRLIRQRGGMQPMSEANTNPSVYYLE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrB NP_805056.2 tetrathionate reductase subunit B Virulence SPI-2 Protein 1e-33 43
ttrB YP_216393.1 tetrathionate reductase complex subunit B Virulence SPI-2 Protein 1e-33 43
ttrB NP_456142.1 tetrathionate reductase subunit B Virulence SPI-2 Protein 9e-34 43
ttrB NP_460350.1 tetrathionate reductase complex subunit B Virulence SPI-2 Protein 9e-34 43
ttrB CAB37414.1 tetrathionate reductase subunit B (TtrB) Virulence SPI-2 Protein 6e-34 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desgi_1120 YP_007944321.1 Fe-S-cluster-containing hydrogenase subunit VFG0486 Protein 3e-34 43