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Name : Clopa_4922 (Clopa_4922) Accession : YP_007943270.1 Strain : Genome accession: NC_021183 Putative virulence/resistance : Virulence Product : Retron-type reverse transcriptase Function : - COG functional category : - COG ID : - EC number : - Position : 8318 - 9565 bp Length : 1248 bp Strand : - Note : PFAM: Reverse transcriptase (RNA-dependent DNA polymerase); Group II intron, maturase-specific domain DNA sequence : ATGGAGAAAACAAAGCCGTTTAACATAACAAAGCAAAGTGTATGGGAAGCGTACAAAAGAGTAAAAGCAAATAAAGGGTC TGCTGGTGTAGACAAAGAATCTATCGAAGACTTTGAAAAGAATCTTAAGAATAATCTATATAAGATATGGAACCGAATGT CCTCGGGAACCTATTTTCCACCACCAGTAAGAGCGGTAGAAATACCCAAGAAAAATGGAGGTATAAGAATATTAGGAGTG CCGACAGTATCAGACAGGATAGCTCAAATGGTAGTAAAGATACACTTTGAACCAAAAGTAGAACCAATATTTCATCCAGA CTCTTATGGGTATAGACCAATGAAATCTGCAATTGATGCAATTGCAATAGTAAGAAAAAGATGCTGGAGATATAACTGGG TTCTTGAGTTTGATATCAAAGGTCTGTTTGATAACATCAACCATGAGCTACTAATGAAAGCTGTAAGAAAACATACTAAC TGTACATGGATACTGCTTTATATTGAAAGATGGCTAACAGCGCCACTTCAAGATAAGGATGGTAGCATAATAACGAGAAC ATCTGGGACCCCTCAAGGCTCGGTGATTAGTCCGGTCTTAGCGAATCTTTTTCTACACTATACCTTCGATAAATGGATGG AAATTAATTTTCCAAGCAATCCATGGGCACGTTATGCAGATGATGCGGTAGCACACTGCAAAACAAAATATGAAGCTGAT AATCTATTGATAAAATTAAACCAAAGGTTTAAACAATGCGCATTAGAGCTACATCCGGAGAAAACACAAATAGTGTACTG TAAAGATGACGACAGGCGTGGGAATTATCCAATAACAAAGTTTGATTTTCTTGGATATACCTTTAGACCGAGAAGGTCTA AGAACAAGTATGGCAAATACTTTATAAGTTTCTTACCGGCAGCCAGTAATAAAGCTTGCAAAGCAATGAGGCAAGTTATA AGAAATTGGAGGATACATCTGAAACCAGATAAGGAAATAATAGATATAGCTATTATGTTTAATCCGGTTATAAGAGGGTG GATAAACTATTATGGATGCTTTTACAAATCAGCGCTATACACAGTTCTGCGTCATATGAATAAAGCATTAGTTCATTGGG CTAGAAGAAAATATAAGAAATTACAAAGACACAGAACAAGAGCAGAAAGATGGATGGGAAGAATTGCTAAGCAATTGCCA AAGTTATTTGCACATTGGCAAATGGGAATTCTGCCTACGGCTGGATGA Protein sequence : MEKTKPFNITKQSVWEAYKRVKANKGSAGVDKESIEDFEKNLKNNLYKIWNRMSSGTYFPPPVRAVEIPKKNGGIRILGV PTVSDRIAQMVVKIHFEPKVEPIFHPDSYGYRPMKSAIDAIAIVRKRCWRYNWVLEFDIKGLFDNINHELLMKAVRKHTN CTWILLYIERWLTAPLQDKDGSIITRTSGTPQGSVISPVLANLFLHYTFDKWMEINFPSNPWARYADDAVAHCKTKYEAD NLLIKLNQRFKQCALELHPEKTQIVYCKDDDRRGNYPITKFDFLGYTFRPRRSKNKYGKYFISFLPAASNKACKAMRQVI RNWRIHLKPDKEIIDIAIMFNPVIRGWINYYGCFYKSALYTVLRHMNKALVHWARRKYKKLQRHRTRAERWMGRIAKQLP KLFAHWQMGILPTAG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13526.1 | reverse transcriptase | Not tested | PAGI-7 | Protein | 1e-126 | 55 |
| unnamed | CAD33771.1 | putative reverse transcriptase | Not tested | PAI I 536 | Protein | 4e-88 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Clopa_4922 | YP_007943270.1 | Retron-type reverse transcriptase | VFG1512 | Protein | 2e-88 | 47 |
