Gene Information

Name : Clopa_0979 (Clopa_0979)
Accession : YP_007939669.1
Strain : Clostridium pasteurianum BC1
Genome accession: NC_021182
Putative virulence/resistance : Unknown
Product : ABC-type multidrug transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1007557 - 1008480 bp
Length : 924 bp
Strand : -
Note : PFAM: ABC transporter

DNA sequence :
ATGAAAGATATAGTATTAAAAACCCATAAACTCTGCAAAAAATATGGCAGCGAATTTGCTGTAAACAATATTAGCATAAC
CATAAACAAGGGAGACATATACGGCTTTATTGGAAGAAACGGAGCTGGAAAAACTACCTTAATAAGAATGATAACTGGAC
TAATCCATAAAACCAGTGGTGAAATTGAACTTCTTGGAAGCTCAGGCAATATAACTTTAGATGAAGCCAGGTCCATGACT
GGAAGTGTTATAGAAACTCCTACCTTTTATGGTGATATGACTGCCAGAGAAAATCTTGAAGTTTCAACACTGGTCAGAAA
TATTCCCGGAAAACAGTGCATAGAAGATGTTTTAAATATGGTAGGTTTAAAGGATGTTAAGAAAAAGAAGGTCAAAAATT
TTTCCTTAGGCATGAGACAGCGTTTAGGCATTGCCAATGCACTTTTAGGAAATCCCCGTTTGCTAATATTGGATGAACCC
ATAAACGGACTGGACCCAGTAAGTGTAGTGAAAATAAGAGAACTGCTAAAAAAAATAAATAAAGAAAAAGAAACTACTAT
ATTAATCTCCAGCCATATATTAAGTGAACTCTCAGAGCTAGCCACCTGCTATGGAATAATTAATAATGGCAAATTGGTAG
AAGAAATTACTTCAGAGGAACTAAGTGAAAAGTGTAAACAGTATATAGAACTTAAGGTAAATAACACTAAAGGAGCTGTA
GTTTTATTGGAAACTGAGCTTGACATTAAAGACTATGTGGTTCATGAAAATAATATAATAAAAATTTATAGTAATCTTGA
TGATGTCGGGAAAATCAATACCTTACTTTCCACTAATGGTATAATTATTGAAAAAATTCTTTCCAAAGGACAAAATCTAG
AAGAATATTTCTTAAATGTTATAGGAGATGAGGCAAATGTGTAG

Protein sequence :
MKDIVLKTHKLCKKYGSEFAVNNISITINKGDIYGFIGRNGAGKTTLIRMITGLIHKTSGEIELLGSSGNITLDEARSMT
GSVIETPTFYGDMTARENLEVSTLVRNIPGKQCIEDVLNMVGLKDVKKKKVKNFSLGMRQRLGIANALLGNPRLLILDEP
INGLDPVSVVKIRELLKKINKEKETTILISSHILSELSELATCYGIINNGKLVEEITSEELSEKCKQYIELKVNNTKGAV
VLLETELDIKDYVVHENNIIKIYSNLDDVGKINTLLSTNGIIIEKILSKGQNLEEYFLNVIGDEANV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH2304 YP_254219.1 ABC-type multidrug transport system, ATPase Not tested ¥ðSh1 Protein 2e-21 41