Gene Information

Name : Clopa_0962 (Clopa_0962)
Accession : YP_007939654.1
Strain : Clostridium pasteurianum BC1
Genome accession: NC_021182
Putative virulence/resistance : Virulence
Product : putative transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 991475 - 991672 bp
Length : 198 bp
Strand : +
Note : PFAM: Helix-turn-helix

DNA sequence :
TTGAAAAATAGATTAGAAGAAATACGTAAGCAACACGGTATGAAGCAGGAAGAACTTGCAGAAGTCTTAGAGGTATCAAG
ACAAACAATAGGTTCTCTTGAGAATGGAAGATATAATCCATCAATTCTTCTTGCTTTTAAGATTGCAAGATATTTTAATA
TGAGTATTGAAGAAATATTTATTTATGAGGAGGAATGA

Protein sequence :
MKNRLEEIRKQHGMKQEELAEVLEVSRQTIGSLENGRYNPSILLAFKIARYFNMSIEEIFIYEEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 7e-11 50
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 8e-09 50
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 6e-09 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Clopa_0962 YP_007939654.1 putative transcriptional regulator VFG2175 Protein 2e-09 50
Clopa_0962 YP_007939654.1 putative transcriptional regulator VFG2168 Protein 2e-09 50