Gene Information

Name : Clopa_0854 (Clopa_0854)
Accession : YP_007939555.1
Strain : Clostridium pasteurianum BC1
Genome accession: NC_021182
Putative virulence/resistance : Virulence
Product : exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 861956 - 862615 bp
Length : 660 bp
Strand : +
Note : PFAM: Bacterial sugar transferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase

DNA sequence : 
ATGTTGCAAAATGCAGAAATAAGGGAAAATATTGAAACTGCTGAATATTCAAAAAGTTTCATGTATTTTTTTCTAAAAAG
ATTACTGGACATATTTGGTTCAGTAATTGGAATTATTCTTTTAAGTCCTGTCATAATAATAACCGCAATAGCAATTAAAC
TTGATTCTAAAGGTCCTGTACTATTCTCTCAAGAGAGAGTGGGAAAAAATGGCAAGCTATTTAAAATGTATAAATTCAGA
TCTATGGTAGTAAATGCAGAGGAATTATTAGTAAAATTAAAAGATAAAAATGAAATGTCTGGTCCAATGTTCAAGATGAA
AGAAGATCCTAGAATAACTAGAGTTGGTAAATTCATAAGAAAGACAAGCCTTGATGAACTCCCACAGCTATTTAATATAA
TTAAAGGGGATATGTCAATGGTTGGACCAAGACCAAATCTACCAAGTGAGGTAGCTGAATTCAGTGATTATCATAAATTA
AAGCTTCTTGCAAAACCAGGACTAACTTGTTATTGGCAGGTTATGGGTAGAAATGAGATAGGTTTTGAGGATTGGATGAA
GCTTGATATAAAGTATATAGAAGAAAGAAATATATGGATAGATATAAAATTAATAGTTAAGACATTCTTTGTATTGTTTG
GAGATAAGAATGCTCATTAA

Protein sequence : 
MLQNAEIRENIETAEYSKSFMYFFLKRLLDIFGSVIGIILLSPVIIITAIAIKLDSKGPVLFSQERVGKNGKLFKMYKFR
SMVVNAEELLVKLKDKNEMSGPMFKMKEDPRITRVGKFIRKTSLDELPQLFNIIKGDMSMVGPRPNLPSEVAEFSDYHKL
KLLAKPGLTCYWQVMGRNEIGFEDWMKLDIKYIEERNIWIDIKLIVKTFFVLFGDKNAH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1N AAL26667.1 type 8 capsule synthesis gene Virulence SCCcap1 Protein 3e-24 43
SSP0070 YP_300160.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 7e-24 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Clopa_0854 YP_007939555.1 exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase VFG1369 Protein 9e-18 47