Gene Information

Name : Clopa_0607 (Clopa_0607)
Accession : YP_007939332.1
Strain : Clostridium pasteurianum BC1
Genome accession: NC_021182
Putative virulence/resistance : Resistance
Product : arsenical-resistance protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 608669 - 609724 bp
Length : 1056 bp
Strand : +
Note : PFAM: Sodium Bile acid symporter family; TIGRFAM: arsenical-resistance protein

DNA sequence :
ATGAGTAGTAAATCACTAAGATTATCATGTCTTGACCGTTATTTAACATTATGGATTTTTATTGCAATGGGACTCGGAAT
ATTTTTAGGATGGGCCTTACCTGGTCTATCTAATGTATTGTCAAGTTTATCAGTGGGGACAACGTCTATTCCAATAGCCG
TAGGACTTATAGTTATGATGTACCCGCCACTTGCCAAGGTCAATTATAAGGAACTTGGAAAGGTTTTTCGTAACCCAAAA
GTATTAGGTCTTTCACTGGTTCAAAATTGGATTATAGGGCCAATTTTAATGTTTGTTTTAGCTGTTATTTTTCTTAGAAA
TTATCCACCTTTTATGGTTGGATTAATTCTTATAGGTCTTGCTAGATGTATTGCTATGGTTATTGTGTGGAACAGTCTAG
CAGATGGAGATAATGAATATGCAGCAGCTTTAGTAGCATTTAACTCCATATTCCAGGTAGTATTCTATTCAATATTTGCT
TATATATTTATTACTGTATTGCCAAGAGCAATAGGTTTACAGGGGATGCAGGTGCATATTTCTATGGGAGAAGTAGCTTA
CTCAGTAATAATTTACTTAGGTATTCCATTTGTTGGAGGTATGCTTACAAGATTATTGTTAGAACCTATGAAAGGAACCG
AATGGTATACTAAAAAATTTATACCTAAGATAAGTCCTTTGGCATTAATAGCCTTATTATTTACTATAGTTATAATGTTT
ACTTTTAAAGGGAAATATATTATAGAACTGCCAATGGATGTTGTAAGAATTGCAATTCCTTTAATTATATATTTTGTTAT
TATGTTCTCTATTTCCTTCTATATAAGTTATAAATCAAAAATAGATTATCATAAAACAGTTAGCCTATCCTTTACTGCTG
CAAGTAACAATTTTGAACTTGCCATAGCAGTTGCAGTTGCAGTGTTTGGTATTCAATCTAAAGAAGCCTTTACTGCTGTT
ATAGGACCGTTGATTGAAGTGCCTGTAATGATTGGACTTGTACATGTAGCTTTAATGTGGGGAAGAAAATACTTTGGTTT
AAAGCAAGAAAAGTAA

Protein sequence :
MSSKSLRLSCLDRYLTLWIFIAMGLGIFLGWALPGLSNVLSSLSVGTTSIPIAVGLIVMMYPPLAKVNYKELGKVFRNPK
VLGLSLVQNWIIGPILMFVLAVIFLRNYPPFMVGLILIGLARCIAMVIVWNSLADGDNEYAAALVAFNSIFQVVFYSIFA
YIFITVLPRAIGLQGMQVHISMGEVAYSVIIYLGIPFVGGMLTRLLLEPMKGTEWYTKKFIPKISPLALIALLFTIVIMF
TFKGKYIIELPMDVVRIAIPLIIYFVIMFSISFYISYKSKIDYHKTVSLSFTAASNNFELAIAVAVAVFGIQSKEAFTAV
IGPLIEVPVMIGLVHVALMWGRKYFGLKQEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsB AFC76433.1 ArsB Not tested AbaR5 Protein 2e-82 61
arsB CAJ77016.1 transmembrane protein of arsenate pump Not tested AbaR1 Protein 1e-82 61
arsB ADZ05767.1 arsenic resistance protein Not tested AbaR11 Protein 5e-73 60

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Clopa_0607 YP_007939332.1 arsenical-resistance protein BAC0573 Protein 1e-94 66
Clopa_0607 YP_007939332.1 arsenical-resistance protein BAC0004 Protein 1e-67 50