Gene Information

Name : Clopa_0567 (Clopa_0567)
Accession : YP_007939292.1
Strain : Clostridium pasteurianum BC1
Genome accession: NC_021182
Putative virulence/resistance : Unknown
Product : DNA/RNA helicase, superfamily II, SNF2 family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 568805 - 570175 bp
Length : 1371 bp
Strand : +
Note : PFAM: SNF2 family N-terminal domain

DNA sequence :
ATGAAATTCATACCACATGCGTACCAAAGATACTGCATAGACAGGGTATTAACGGATAAAGCAATAGGATTGTTCCTTGA
CATGGGGCTTGGAAAAACAGTTATAACACTTACTGCAATAAACGATTTAAAGTATAACAAGTTTGCAATATCAAAAGTAC
TTGTTATAGCGCCAAAGAAAGTAGCAGAAGCAACATGGGCAAAGGAAGCTGAAAAATGGGATCACTTAAGAATGCTTAGA
GTTATTTCAGTACTTGGGCCAAAGACTAAAAGGATAAGAGCAATTAATACACCTTCAGACATTTATGTTATCAATCGTGA
AAATGTACCATGGCTTGTAGAATATTATAAAAATGCATGGCCATTCGATATGGTGGTTGTAGATGAATTCAGCAGCTTTA
AAAATCATCAGGCCAAAAGATTTAAATCACTTACATGGGTTCGGAATCACATTGATAGATTTATAGGACTTACTGGAACA
CCGGCACCTAACGGACTGCTTGATATATGGGCGCAGATTTATTTACTGGATGAAGGTAAAAGACTTGGAAAAAGAATAAC
ACATTTTCGTGAAAGATATTTTCAACCGGATCAGAGAGATAGAGACCATGTGTTTAGTTATATGCCAAAGCCGGGAGCCA
ATGAAACTATACAGGAACTTATAGGTGATATATGTGTAAGCATGAAAGCAGAGGATTATTTGGAGCTTCCGGATTGCATC
ACAGTTACTACACCAGTAATACTGGACAGCAAGGCTAAGAAATCTTACGAAAAGCTTGAAAAGGAAATGCTTCTTGAGGT
TGATGAATCAACAATTGATGCAGGAACAGCAGCAGTACTTACAAATAAGCTTTTACAGCTTTGTAATGGTGCTGTGTATG
ATGAAAACAGAAACATAGTTGAGATACATTCGTGTAAGATTGATGCATTCCTGGAGCTTGTAGAAGGACTTAATGGGCAA
TCAGCATTAGTATTTTATAATTTCCAGCATGACCTTATGAGAATAAAAAAGGCATTAGAGGGAATGAAACTTAGAGTTAG
ACAGCTTAAAGGTCCACAGGATGAAGATGACTGGAATGATGGAAAGATTGATATACTACTAGCCCATCCTGCCAGCTGTG
CATATGGCCTTAATCTTCAAAGAGGGGGTCATCATGTTATATGGTTTGGACTTAATTGGAGCTTAGAATTATACCAGCAA
GCTAATAAAAGGCTTCACAGACAAGGCCAAAAGGATAAAGTTATAATACATCACCTTGTTGTAGATGATGGAGTGGATCA
TGACGTTATGATGGCACTGGAAGATAAAAGCGGAACCCAGGATAATCTTATGAATGCATTAAAAGCTAGAATTAAAAAAT
ATAAGGAGTAG

Protein sequence :
MKFIPHAYQRYCIDRVLTDKAIGLFLDMGLGKTVITLTAINDLKYNKFAISKVLVIAPKKVAEATWAKEAEKWDHLRMLR
VISVLGPKTKRIRAINTPSDIYVINRENVPWLVEYYKNAWPFDMVVVDEFSSFKNHQAKRFKSLTWVRNHIDRFIGLTGT
PAPNGLLDIWAQIYLLDEGKRLGKRITHFRERYFQPDQRDRDHVFSYMPKPGANETIQELIGDICVSMKAEDYLELPDCI
TVTTPVILDSKAKKSYEKLEKEMLLEVDESTIDAGTAAVLTNKLLQLCNGAVYDENRNIVEIHSCKIDAFLELVEGLNGQ
SALVFYNFQHDLMRIKKALEGMKLRVRQLKGPQDEDDWNDGKIDILLAHPASCAYGLNLQRGGHHVIWFGLNWSLELYQQ
ANKRLHRQGQKDKVIIHHLVVDDGVDHDVMMALEDKSGTQDNLMNALKARIKKYKE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAUSA300_1408 YP_494105.1 phage helicase Not tested ¥ÕSa2 Protein 3e-92 51
MW1405 NP_646222.1 hypothetical protein Not tested ¥ÕSa2 Protein 3e-101 51
SAOV_0314 YP_005735831.1 putative DNA helicase Not tested ¥ÕSa1 Protein 5e-102 51
SEQ_2070 YP_002747285.1 SNF2 family phage protein Not tested ¥ÕSeq4 Protein 2e-88 50
SH1779 YP_253694.1 hypothetical protein Not tested ¥ÕSh1 Protein 3e-99 50