Gene Information

Name : Clopa_4817 (Clopa_4817)
Accession : YP_007943177.1
Strain : Clostridium pasteurianum BC1
Genome accession: NC_021182
Putative virulence/resistance : Resistance
Product : ABC-type antimicrobial peptide transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4899558 - 4900238 bp
Length : 681 bp
Strand : +
Note : PFAM: ABC transporter

DNA sequence :

ATGATTGAAGTAAAAAATCTCAGTAAAATTTACACAATGGGCAAAGAGAAAGTTTACGCACTAGATAATATTTCTCTAAG
TATAAAAGATGGAGAATTTGCTGCTATCGTTGGTCCATCAGGCTCTGGAAAATCCACATTGATGAATATTTTAGGCTGTC
TTGATGTACCTACTCAGGGAAATTATATATTAGATGGTAAACCCGTTGAAAGCTTAAATGATGATCAACTTGCTGAAATA
CGAAACGAAAAAATAGGCTTTATATTTCAAAGATACAATTTACTTACAAAACTAAATGTTTACGAAAATGTGGAAATACC
ACTAATTTATTTGGGTCTAAATTCAGGAGAGAGAAAACAGAGAGTAATTGATGCCTTGGAACAAGTAGGTTTATCAACGC
GTACTCATCATAAACCTACTGAGCTTTCTGGTGGTCAGCAGCAAAGAGTATCCATAGCAAGAGCTCTTGCCACTAACCCC
TCATTAATAATGGCAGATGAACCTACAGGAGCTTTGGACAGTAAAACTGGTAAAGAAGTCCTTGCATTATTACAGGATCT
CCATAAAACTGGAAGAACAATTGTATTAATAACTCATGATCTTGCTATAGCCGAAAAAGCAGAAAGAAGAATACAAGTAA
AGGATGGTCACATAATTTCTGATGATGGGAGGAATATGTAA

Protein sequence :

MIEVKNLSKIYTMGKEKVYALDNISLSIKDGEFAAIVGPSGSGKSTLMNILGCLDVPTQGNYILDGKPVESLNDDQLAEI
RNEKIGFIFQRYNLLTKLNVYENVEIPLIYLGLNSGERKQRVIDALEQVGLSTRTHHKPTELSGGQQQRVSIARALATNP
SLIMADEPTGALDSKTGKEVLALLQDLHKTGRTIVLITHDLAIAEKAERRIQVKDGHIISDDGRNM

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
Cp1002_1464	YP_005681730.1	ABC transporter ATP-binding protein	Not tested	PiCp 5	Protein	2e-33	43
cpfrc_01473	YP_003783873.1	hypothetical protein	Not tested	PiCp 5	Protein	5e-34	42
CpI19_1473	YP_005685914.1	ABC transporter ATP-binding protein	Not tested	PiCp 5	Protein	5e-34	42
CpC231_1466	YP_005683828.1	ABC transporter ATP-binding protein	Not tested	PiCp 5	Protein	5e-34	42
cur_1502	YP_001800896.1	cell division ATP-binding protein FtsE	Not tested	Not named	Protein	1e-34	41

• Homologs from CARD and BacMet (resistance genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
Clopa_4817	YP_007943177.1	ABC-type antimicrobial peptide transport system, ATPase component	NC_012469.1.7686878.	Protein	6e-58	54
Clopa_4817	YP_007943177.1	ABC-type antimicrobial peptide transport system, ATPase component	CP001581.1.gene798.p	Protein	2e-44	50
Clopa_4817	YP_007943177.1	ABC-type antimicrobial peptide transport system, ATPase component	NC_008702.1.4606598.	Protein	7e-50	48
Clopa_4817	YP_007943177.1	ABC-type antimicrobial peptide transport system, ATPase component	CP001581.1.gene598.p	Protein	4e-41	45
Clopa_4817	YP_007943177.1	ABC-type antimicrobial peptide transport system, ATPase component	NC_012469.1.7686946.	Protein	2e-30	42
Clopa_4817	YP_007943177.1	ABC-type antimicrobial peptide transport system, ATPase component	NC_012469.1.7685735.	Protein	1e-32	41