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Name : Clopa_4769 (Clopa_4769) Accession : YP_007943129.1 Strain : Clostridium pasteurianum BC1 Genome accession: NC_021182 Putative virulence/resistance : Unknown Product : Retron-type reverse transcriptase Function : - COG functional category : - COG ID : - EC number : - Position : 4843338 - 4844582 bp Length : 1245 bp Strand : - Note : PFAM: Reverse transcriptase (RNA-dependent DNA polymerase); Group II intron, maturase-specific domain DNA sequence : ATGAAAGAAGGAAAGCCGTTTGAGATTTCAAAACATCAAGTAATGGAAGCGTACAAATGCGTAAAAGCGAATAAAGGCGC AAGCGGCACTGATGGAGTAAACTTCACTAAATTTGAAGAGAATTTGAAAAACAATCTATACAAAATTTGGAACAGGATGT CATCAGGATGCTATTTTCCCGCCTCAGTCAGAGGAGTGGAAATAACGAAAAAGGATGGAAAGACAAGATTGCTTGGAATT CCAACCATTAGCGACAGGGTTGCTCAGATGGTGGTGCGAATGAACTTTGAACCACAAGTGGAGCCAATATTCTGCGATGA TTCGTATGGATACAGGCCGAATCGTTCTGCATTGGATGCAGTGGGTACAGCTCGTGAGCGGTGCTGGGAAATGCCATGGG TCATTGATTTTGACATCAAAGGGCTATTTGACAACATTGACCATGAACTGATGATGAAAGCAGTATGCAAACATACTGAT AACAAATGGGTAATTATGTATATTGAAAGGTTTCTGAAAGCGCCAATTGCGATGCCAGACGGAACTGTCCAAGAGCGGAA TGCCGGTACTCCACAAGGAGGGGTAATCAGTCCAGTACTAGCAGATCTGTTTATGCATTATGCATTCGATTGGTGGATGA AACAAAAGCACCCTCAGAATCCTTGGGAAAGATATGCAGACGATGCTGTAATTCATTGTCGGACAAAGGAAGAAGCAAAG GTGTTGCTGGTTCAGCTTAAAGAACGCATGACAGAATGCAAATTGGAAGTACATCCAAATAAAACAAAAATTGTATATTG TAGAAGCGATGTATATCCAGAGCACCATGAACATGAATCCTTTGACTTTCTTGGATACACTTTTCGTAGGCGTATTGTGA GGAGCAGACATGGAAACTTTTTCAATAGCTTTACACCGGCGGTCAGCAAAGGCGCAAGCCAACATCTGAGGGACAGTGTC AGAGAGATACGAAGAAAGCATAAAGTTGCTTCACTCGAAGAGTTGGCTGAGCAGATGAATCCTGTTCTTAGAGGTTGGAT GAATTATTTTTGCAAGTATAGTGCAGGTGAGGCAAGAAATGTTCTCAACTATGTAAATCTCACACTGATCCAGTGTATTA GGTACAAATACAAATCGACAGGAAGAAAGCACTTAAAGTCTCATAAATTGCTTGGTCGCATTTGTAAGGAGCAACCAAAT CTATTTTACCACTGGCAGATGGGGCTCCGCCCGTCGGTTGGATAA Protein sequence : MKEGKPFEISKHQVMEAYKCVKANKGASGTDGVNFTKFEENLKNNLYKIWNRMSSGCYFPASVRGVEITKKDGKTRLLGI PTISDRVAQMVVRMNFEPQVEPIFCDDSYGYRPNRSALDAVGTARERCWEMPWVIDFDIKGLFDNIDHELMMKAVCKHTD NKWVIMYIERFLKAPIAMPDGTVQERNAGTPQGGVISPVLADLFMHYAFDWWMKQKHPQNPWERYADDAVIHCRTKEEAK VLLVQLKERMTECKLEVHPNKTKIVYCRSDVYPEHHEHESFDFLGYTFRRRIVRSRHGNFFNSFTPAVSKGASQHLRDSV REIRRKHKVASLEELAEQMNPVLRGWMNYFCKYSAGEARNVLNYVNLTLIQCIRYKYKSTGRKHLKSHKLLGRICKEQPN LFYHWQMGLRPSVG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13526.1 | reverse transcriptase | Not tested | PAGI-7 | Protein | 1e-93 | 45 |
