Gene Information

Name : Clopa_4691 (Clopa_4691)
Accession : YP_007943057.1
Strain : Clostridium pasteurianum BC1
Genome accession: NC_021182
Putative virulence/resistance : Resistance
Product : ABC-type antimicrobial peptide transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4757519 - 4758286 bp
Length : 768 bp
Strand : -
Note : PFAM: ABC transporter

DNA sequence : 
ATGAATGTAATGGAAGTTAGAAATGTTAAAAAGGTTTACAGCTCAAAATTAAATGGAAACCAATCACAGGCCTTAAAGGA
CATAAGCTTTTCTGTTAAAAAAGGTGAATTTTTAGGTATTATGGGGCCTTCAGGCTCAGGCAAATCAACTCTTTTGAATG
TTATATCTACTATAGACACGCCAACTGGCGGAACTGTAATCATTGGAGGTAAAAGTATAATTAATCTTGATGAAGATGAA
TTGTCAGAATTTAGACGCAGCAGACTTGGCTTTATATTTCAAGATTATAATTTGCTGGATACACTTACACTTAAGGAAAA
TATCATCCTTCCACTGTCTCTTGCAAGACAAGATGTTAGATTGATTGAAGAAAAGGTAAAGAAAATAAGTGCAGTACTTG
GCATTGACAACATACTTGATAAGTCTCCTTATGAAGTTTCAGGTGGCCAAAAACAAAGAGCTGCAGCGGCAAGAGCAATT
ATAACGGAACCAGAGCTGATTCTAGCGGATGAACCTACTGGAGCACTTGATTCAAAGTCTTCAACGGAGCTCTTAGAGAA
CCTTTCTGAGCTTAACAAACAGAATGCTGCAACAATAGTTATGGTTACTCACGATGCTTTCTCTGCCAGTTACTGCAATA
GAATTATATTTATCAAGGATGGACTTTTGAATTGTGAACTTGAAAGAAAGGGCAGCAGGAAGGAATTTTTCAATGAGATT
CTTGAAACACTTTCTACTTTGGGAGGTGCTTTAAGTGACATTGTTTAA

Protein sequence : 
MNVMEVRNVKKVYSSKLNGNQSQALKDISFSVKKGEFLGIMGPSGSGKSTLLNVISTIDTPTGGTVIIGGKSIINLDEDE
LSEFRRSRLGFIFQDYNLLDTLTLKENIILPLSLARQDVRLIEEKVKKISAVLGIDNILDKSPYEVSGGQKQRAAAARAI
ITEPELILADEPTGALDSKSSTELLENLSELNKQNAATIVMVTHDAFSASYCNRIIFIKDGLLNCELERKGSRKEFFNEI
LETLSTLGGALSDIV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAP55232.1 unknown Not tested SaPIbov2 Protein 6e-25 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Clopa_4691 YP_007943057.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene798.p Protein 3e-34 46
Clopa_4691 YP_007943057.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene598.p Protein 7e-33 44
Clopa_4691 YP_007943057.1 ABC-type antimicrobial peptide transport system, ATPase component NC_012469.1.7686878. Protein 2e-28 41