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Name : Clopa_4560 (Clopa_4560) Accession : YP_007942936.1 Strain : Clostridium pasteurianum BC1 Genome accession: NC_021182 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase (class II) Function : - COG functional category : - COG ID : - EC number : - Position : 4621766 - 4623304 bp Length : 1539 bp Strand : - Note : PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial DNA sequence : ATGTCAAATGAAAAAGAGTCATTGACAAAAGAGGAAATAAAATTACAAAGACTTCAAGCAAAAGCTGAAGCTGAAATGAA CGATTTATTAAAAGAGAGAAGACAGAAGCTTTCAGATCTTCAGGCAGCAGGAAAAGATCCTTTTGATGTTTATTCTGTGG AGAGAACTCATACATCTCAGCAGATAAAAGAAAATTATGATGAACTTGAAGATAAAACAGTTACTGTTGCAGGAAGGCTC ATGTCTAAAAGAGTACATGGAAAGGCTGGATTTTCTGATATTTTTGACAGATACGGTAAAATACAACTTTATATAAAAAT AGACGATGTAGGTGAAGAAAAGCTTAAGGCTTACAAAACTTTTGATATAGGAGACTTTGTATCAATAACTGGTAGAGTAT TTAAGACAAAAACAGGTGAAGTTAGTATACATATTACAGACTTTGAACTTTTATCTAAATCTTTAAAGCCACTACCAGAA AAATTCCATGGTTTAAAGGATCCAGATTTAAGATATAGACAGAGATATGTTGATCTTATAATCAATCAGGAGGTTAGAGA TACTTTCTTTAAGAGAACTGCTATTATAAAGGCTATAAGAGAGTTTTTGGACAATAGAGAATATCTTGAGGTTGAAACAC CTATATTGTCACCTATAGCTGGTGGAGCGGCTGCTAGACCTTTTGATACCCATCACAATGCACTGGATATAGATATGTAT CTTAGAATAGCAACAGAACTATATCTAAAGAGGCTTATTGTAGGTGGATTTGAAAAGGTATATGAAATAGGTAAGAACTT TAGAAATGAAGGTATAGATGTAAGACATAACCCGGAATTTACCATGATAGAATTATATGAAGCCTATGCTGATTATAACG ATATGATGGAAATAACAGAAAATATGGTTGCCTATGTTTGTGAAAAGGTACTTGGAACAACTAAAGTAACATATCAAGGT ACTGAAATAGATTTTAAGCCGCCATGGAAGAGAATAACTATGGTGGATGCTGTTAAGGAATATGCCGGAGTTGATTTTAG TGAAATAAAATCAGATGAAGAAGCAAGATCTATAGCTAAAGAAAAGGGACTTGAGCTCAAGAAAAACCTAGAGGATTGTA CAAAAGGCGATATATTAAATGAGCTTTTCGAAGCTTTTGGTGAGGAAAAGATGATACAGCCTACCTTTGTATATGATTAT CCAGTAGAAATATCACCTCTTACCAAGAAGAAGAGAGGTAATGAGGATTTCACAGAAAGATTTGAAGGTTTTATATATGG AAGAGAATTATGTAATGCCTACTCAGAACTTAATGATCCAATAGTTCAAAAGGATAGATTTGTACAACAACTTAGGGAAA GAGAACTTGGAGATGATGAAGCATATATGATGGATGATGATTTTATTAACGCTTTGGAAATTGGAATGCCTCCAACTGGT GGACTTGGAATAGGTATTGATAGACTTATTATGTTTTTAACAGATGCTTATTCCATAAGGGATGTTATATTATTTCCTAC AATGAAACCATTAGCATAA Protein sequence : MSNEKESLTKEEIKLQRLQAKAEAEMNDLLKERRQKLSDLQAAGKDPFDVYSVERTHTSQQIKENYDELEDKTVTVAGRL MSKRVHGKAGFSDIFDRYGKIQLYIKIDDVGEEKLKAYKTFDIGDFVSITGRVFKTKTGEVSIHITDFELLSKSLKPLPE KFHGLKDPDLRYRQRYVDLIINQEVRDTFFKRTAIIKAIREFLDNREYLEVETPILSPIAGGAAARPFDTHHNALDIDMY LRIATELYLKRLIVGGFEKVYEIGKNFRNEGIDVRHNPEFTMIELYEAYADYNDMMEITENMVAYVCEKVLGTTKVTYQG TEIDFKPPWKRITMVDAVKEYAGVDFSEIKSDEEARSIAKEKGLELKKNLEDCTKGDILNELFEAFGEEKMIQPTFVYDY PVEISPLTKKKRGNEDFTERFEGFIYGRELCNAYSELNDPIVQKDRFVQQLRERELGDDEAYMMDDDFINALEIGMPPTG GLGIGIDRLIMFLTDAYSIRDVILFPTMKPLA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 1e-98 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Clopa_4560 | YP_007942936.1 | lysyl-tRNA synthetase (class II) | VFG1668 | Protein | 7e-99 | 48 |
