Gene Information

Name : Clopa_4526 (Clopa_4526)
Accession : YP_007942912.1
Strain : Clostridium pasteurianum BC1
Genome accession: NC_021182
Putative virulence/resistance : Unknown
Product : transcription termination/antitermination factor NusG
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4591703 - 4592257 bp
Length : 555 bp
Strand : -
Note : PFAM: Transcription termination factor nusG; TIGRFAM: transcription termination/antitermination factor NusG

DNA sequence :
ATGGGACTAGGAATAAATCCTAATCCTAAGATTATGGGAGAAAAAGCTAGATGGTATGTAGTACATACATATTCAGGGTA
TGAAAATAAAGTTAAGGCCAATATAGAAAAGACTATAGAAAATAGAAATATTCATGATTTGATCTATGATATTCAAGTGC
CTATGGAAGAAGAAATTGAAGAAAAAGACGGCAAGAAAAAAGTAACTCTTAAGAAGGTTTTTCCTGGATATGTTCTAATT
AAGATGATAATGACCGATGATTCTTGGTATGTAGTTAGAAATACAAGAGGAGTAACTGGATTCGTTGGCCCAGGATCTAA
ACCAGTAGCGCTCACTGATGAAGAAGTTGATTCTATGGGTATCGTTGAGAAACCTGTAAAAATTGATATTGAAGTGGGTG
AAAGCGTTAAAGTAATTAGTGGACCTTTAGAAAATCAAATTGCTTTAGTTCAGGAAATTACTGAGGATAAGCAAAGAATT
AAGGGCTTAGTTAATATGTTTGGCAGGGAAACTCCTGTTGAACTTGAATTTAATCAAATACAAAAATTAGATTAG

Protein sequence :
MGLGINPNPKIMGEKARWYVVHTYSGYENKVKANIEKTIENRNIHDLIYDIQVPMEEEIEEKDGKKKVTLKKVFPGYVLI
KMIMTDDSWYVVRNTRGVTGFVGPGSKPVALTDEEVDSMGIVEKPVKIDIEVGESVKVISGPLENQIALVQEITEDKQRI
KGLVNMFGRETPVELEFNQIQKLD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
nusG YP_281502.1 transcription antitermination protein NusG Not tested Not named Protein 2e-23 43
nusG YP_006310753.1 transcription antitermination protein NusG Not tested FWisland_4 Protein 2e-25 42
BJAB0868_00345 YP_008211671.1 Transcription antiterminator Not tested AbaR26 Protein 2e-22 41
BJAB07104_00341 YP_008207806.1 Transcription antiterminator Not tested AbaR25 Protein 2e-22 41