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Name : Clopa_4401 (Clopa_4401) Accession : YP_007942790.1 Strain : Clostridium pasteurianum BC1 Genome accession: NC_021182 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : - COG ID : - EC number : - Position : 4466815 - 4468803 bp Length : 1989 bp Strand : - Note : PFAM: Transketolase, thiamine diphosphate binding domain; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; TIGRFAM: transketolase, bacterial and yeast DNA sequence : ATGAACAATTTAGATCAACAAGTAGTAAATACTATAAGGATATTATCAGCAGAAGGAGTTCAAAAGGCAAATTCAGGACA TCCAGGATTACCTTTAGGAGCAGCTCCAATGGCCTATGCTCTATGGGGTAAAGAAATGAAGCATAATCCCAAAAATCCAA ATTGGGTAGATAGAGATAGATTTATACTCTCAGCAGGGCATGGTTCCATGCTGTTATATTCCTTACTTCATTTATTTGGA TACGGTCTTAGTGTAGATGATTTAATGAATTTTAGGCAATGGGGAAGTAAGACACCAGGTCATCCTGAATACGGTCATAC AGTGGGGGTTGAAGTTACTACAGGGCCACTTGGACAAGGAATAGCCAATGGAGTAGGTATGGCTATAGCTGAGCAATATC TAGGAAGTAAATTTAATAAGCCCAATTACAAAGTAGTAGACCATTATACCTTTGCTCTGTCTGGCGACGGCTGCATGATG GAAGGAATCTCAAGTGAAGCAGCTTCTTTAGCGGGTACCTTAGGACTTGGTAAACTTATAGTATTGTATGATTCTAATAA TATATCAATAGAAGGAAGTACTGATATTGCCTTTAGAGAAGATGTAGCTAAAAGGTATGAAGCCTATGATTGGCAGGTTA TAAGGGTTGAAGATGGAAATGACATTCACTCTATTACAAAGGCTATTGAAACCGCAAAAGCTGAAGATAGCAAACCAACC ATTATAATAGTAAAAACACAAATTGGATATGGATCTCCAAAGCAAGGTACTGCAGGTGCCCATGGTGAGCCTTTAGGTGA AGAAAACATAAAGAAAACAAAAGAATTTTTGAACTGGAAAGGTGAAGGGGAATTTTATGTTTCAAAGGAAGTAAGATCAC ATATGGAAACATTACAAAAAGCTGGAGAAGAAAAAGAAATTCAATGGAACAAGCTTTTTGAGAATTATAAAAAAGAATAT CCACAGCTGGCAGATGATTGGGAAATATGGTATTCAGATAGTATTGCATCAGATATTTTAGAGGAAGAGGATTTTTGGAA ATTTCAAGGTAAATCGGCTACAAGAGTTTCCTCTGGTGAGATTATAAATAGACTTGTTAAATTTGTACCAAATTTAATAG GTGGTTCTGCAGACTTATCTCCTTCAACTAAAACTTATATGAAGGATAGGGGAGATTTTTCTAAAGAAGATAAAAGTGGT GCAAATCTTCATTTTGGAGTTAGAGAACATGCTATGGCAGCTATTGGAAATGGTATAGCATTACATGGAGGACTTAAAAT TTTTGTCTCAACCTTCTTTGTATTTAGTGATTACATGAAGGGTGCAATGAGACTTTCAGCATTAATGAAGCTTCCTGTAG TATATGTACTAACTCATGATAGTATTGGTGTTGGAGAAGATGGACCAACACATGAGCCAATAGAGCAATTAGCTGCTTTA AGAAGTATACCTAATTTCCATGTATTTAGGCCAGCAGATTCTAAGGAAACAGCTGCAGCTTGGTATTCAGCTATTAGCAG AACCGATGGGCCAACGGCTTTAATACTTTCAAGGCAGAACCTTCCTCTATATGAAGAGAGTTCAAAGAATGCATTAAAGG GAGCATATATATTAAAAGAAAGTTCTAAGGAAACACCGGATATTATTCTTATGGCAACAGGTTCGGAAGTGGAATACATT TATGAAGCAGCAAAATTATTGGAGGAAAAAGGTATAGCTGCCAGAGTAATAAGTATGCCTTGTTTAGAAATATTTGATAA GCAGGATGAGGACTATAAGGACAGTATTCTTCCTAAGAAGGTGAGAAATAGAATTGCAGTAGAGGCAGCAGCATCCTTTG GATGGCACAAGTATGTGGGCTTAGATGGAGATATAGTGGCTATAGACCATTTTGGAGCATCTGCACCAGGAGATATATTG TATAGAGAATTTGGAATTACTGTAGATAATATTGTTGAAAGGGCTTTAAAACTAGTTAAAGCTAAATAA Protein sequence : MNNLDQQVVNTIRILSAEGVQKANSGHPGLPLGAAPMAYALWGKEMKHNPKNPNWVDRDRFILSAGHGSMLLYSLLHLFG YGLSVDDLMNFRQWGSKTPGHPEYGHTVGVEVTTGPLGQGIANGVGMAIAEQYLGSKFNKPNYKVVDHYTFALSGDGCMM EGISSEAASLAGTLGLGKLIVLYDSNNISIEGSTDIAFREDVAKRYEAYDWQVIRVEDGNDIHSITKAIETAKAEDSKPT IIIVKTQIGYGSPKQGTAGAHGEPLGEENIKKTKEFLNWKGEGEFYVSKEVRSHMETLQKAGEEKEIQWNKLFENYKKEY PQLADDWEIWYSDSIASDILEEEDFWKFQGKSATRVSSGEIINRLVKFVPNLIGGSADLSPSTKTYMKDRGDFSKEDKSG ANLHFGVREHAMAAIGNGIALHGGLKIFVSTFFVFSDYMKGAMRLSALMKLPVVYVLTHDSIGVGEDGPTHEPIEQLAAL RSIPNFHVFRPADSKETAAAWYSAISRTDGPTALILSRQNLPLYEESSKNALKGAYILKESSKETPDIILMATGSEVEYI YEAAKLLEEKGIAARVISMPCLEIFDKQDEDYKDSILPKKVRNRIAVEAAASFGWHKYVGLDGDIVAIDHFGASAPGDIL YREFGITVDNIVERALKLVKAK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 4e-148 | 50 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 5e-146 | 47 |
