Gene Information

Name : Clopa_4344 (Clopa_4344)
Accession : YP_007942738.1
Strain : Clostridium pasteurianum BC1
Genome accession: NC_021182
Putative virulence/resistance : Resistance
Product : ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4410276 - 4411115 bp
Length : 840 bp
Strand : -
Note : PFAM: ABC transporter

DNA sequence :
TTGAGTTTAGTCATTGATGGAGTCAGTAAGAAGTTTATAACAAAAAGTAAGGAAACTTTTACACTGGACAATATAAATCT
TTCTTTTAAAAAGGGAGAGTTTATATGTCTTTTGGGGCCCTCGGGCTGTGGTAAATCCACTCTGCTTAATATAATTGCAG
GTCTTGAAAAACCTACTTCGGGAAAAGTAACCTTAAAGGATAAAGAAGTAAAGGAAGTTGGACCGGATAAGGCCTTTATG
TTTCAGGAAGCCGCATTGTTTCCTTGGCTTAGTGTCATAGAGAATGTAGAGTTTGGAATGAAAATGGCAGATGTATCAAA
AGAGCAGCGAAGAGAAAAAGCTTTAAAATATTTAAAGATGGTACATCTAACTAAATTTCAAAATTCTTTTCCACATGAAT
TGTCTGGTGGAATGAGGCAGAGAGTTTCTCTTGCCAGAGCTTTAACTCTTGATTCGGAAGTGCTTTTAATGGATGAGCCA
TTTTCAGCCTTAGACAGTCAGACTAAAAGTATACTTCAGCTTGAACTTCAAAAGATTTGGTGGGAAACAAAGAAAACTAT
AGTATTTGTAACTCATAATGTGGAAGAGGCCGTACTTTTAGGCGATAGAGTAATAGTAATGTCTGCTAATCCAGGAAGAG
TGAAAAGAGAATTTAAAATAGAACTAGCAAGGCCAAGGGAAGCGCAGAGTATAGATCTTACTTATGTAGTTTCCGAGGTT
ATGAAAGAGTTAAAAGAGGAGGTGGAGAAGGTTGCAAAAGCTGAATACGACAGTGATTGGAGTATTGAAGAGAATAATAT
TTTATATAATTCTGATAATGATATGGGAAATGGTTTATAA

Protein sequence :
MSLVIDGVSKKFITKSKETFTLDNINLSFKKGEFICLLGPSGCGKSTLLNIIAGLEKPTSGKVTLKDKEVKEVGPDKAFM
FQEAALFPWLSVIENVEFGMKMADVSKEQRREKALKYLKMVHLTKFQNSFPHELSGGMRQRVSLARALTLDSEVLLMDEP
FSALDSQTKSILQLELQKIWWETKKTIVFVTHNVEEAVLLGDRVIVMSANPGRVKREFKIELARPREAQSIDLTYVVSEV
MKELKEEVEKVAKAEYDSDWSIEENNILYNSDNDMGNGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 3e-38 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Clopa_4344 YP_007942738.1 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component NC_012469.1.7686878. Protein 3e-25 42