Gene Information

Name : Clopa_4338 (Clopa_4338)
Accession : YP_007942732.1
Strain : Clostridium pasteurianum BC1
Genome accession: NC_021182
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4404398 - 4405300 bp
Length : 903 bp
Strand : -
Note : PFAM: Porphobilinogen deaminase, C-terminal domain; Porphobilinogen deaminase, dipyromethane cofactor binding domain; TIGRFAM: porphobilinogen deaminase

DNA sequence : 
ATGAAATCTAAAATTATAATAGGTACTCGTGGAAGTAAACTGGCAGTTACTCAGACTAATATGGTTATTGAAAATCTTAA
GAAGCATTATCCAAATCTCATTATAGAAGTAAGGCAGATTAAGACCACTGGAGATAAAATACTGGATAAAAGCTTAAGTA
AAATAGGCGGTAAAGGATTATTTATAGCAGAAATAGAGAATGCATTGAAAAATCATGAAATAGATTTAGCTGTTCACAGC
ATGAAGGATGTGCAAAATGTTGTGATAGAGGATTTTGAAATTTTGTCTGTGTTAAAGCGAGAAGATCCTAGAGATGTTTT
GGTTGCTAAGAAAAAAATATCTCTTTTGGATTTACCAGAAGGGGCTGTTATAGGCACCAGCAGCCTTAGAAGGATGGTAC
AGCTGAGGAGGCTTCGCCCTGATTTTCAGTTTAAACTTTTAAGAGGAAACATAGATACCAGAATAAATAAAATGTTAAAT
GGAGAAGCTGACGGAATAATATTGGCAGCAGCTGGTCTTAAGAGAATGGGCTGGGAAAATAGAATATCAGAATACGTTGA
TATACATAAATGTATACCTTCTGTGGGACAGGGAGCATTATGTGTGGAATTCAGAAGTGGAGACAGGGAAGTAAAGGATA
TTGTAAGCGCTCTGGTGAGGGAAATAGAATTTAAATGCTTGCTTTCAGAACGCAGCTTTTTAAGAGAAATGAATGGAGGC
TGCAGTATTGCTATAGGTGCTCACAGCACTGAAATCAATGGCAAAATTGAGTTGGAAGGTTTTGTATGTGATGATGATAA
TGCTGCTATTTTTAAAAGCAAAGTAGTAGGGAATATAGATGAATATGAAAATATCGGGATAGAACTTGCTAAAAAACTTA
TGAAACTTAAGGAGGAAAAATAA

Protein sequence : 
MKSKIIIGTRGSKLAVTQTNMVIENLKKHYPNLIIEVRQIKTTGDKILDKSLSKIGGKGLFIAEIENALKNHEIDLAVHS
MKDVQNVVIEDFEILSVLKREDPRDVLVAKKKISLLDLPEGAVIGTSSLRRMVQLRRLRPDFQFKLLRGNIDTRINKMLN
GEADGIILAAAGLKRMGWENRISEYVDIHKCIPSVGQGALCVEFRSGDREVKDIVSALVREIEFKCLLSERSFLREMNGG
CSIAIGAHSTEINGKIELEGFVCDDDNAAIFKSKVVGNIDEYENIGIELAKKLMKLKEEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 1e-44 42
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 1e-44 42