Gene Information

Name : Clopa_4044 (Clopa_4044)
Accession : YP_007942461.1
Strain : Clostridium pasteurianum BC1
Genome accession: NC_021182
Putative virulence/resistance : Resistance
Product : cystathionine beta-lyase/cystathionine gamma-synthase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4091286 - 4092431 bp
Length : 1146 bp
Strand : -
Note : PFAM: Cys/Met metabolism PLP-dependent enzyme

DNA sequence : 
ATGAAGATTGAATCATTGGTAATTCACGGAGGAATAGATGGGGACGATAAGACAGGTGCAGTAAATGTTCCAATTTATCA
GACCTCAACTTATAAGCAGCCAAGCTTTGGACACAATACAGGATATGAATATTCAAGAACTGGTAATCCAACAAGAGAGG
CACTAGAAAAACTTATAGCAGATTTGGAACATGGATATGCAGGTTTTGCTTTTGCTTCTGGTATGGCTGCAATTACAGCA
GTTATATCTTTATTTAAAACTGGAGACAAGGTAATAATATCTAACAATGTCTATGGGGGAACCTTTAGAGTTTTAGATAA
AGTTTTTAATCATTTCAATATAGGATATAAAATTGTTGATACTACAGATTTAGAAGCAGTAAAAAATAATGTAGATGAAA
ATGTAAAAGCAATATATATAGAGACACCAACAAACCCACTTATGGATATAACTGATATAGAGGGTATATCAAAAATAGCA
AAAGAAAAAGGAATTTTTACTATAGTTGATAACACTTTTATGACTCCATACCTTCAAACGCCAATCGATTTAGGTGTAGA
TATAGTTGTTCATAGTGCTACTAAATATTTGGGAGGACATAGTGATGTTGTTTCTGGCCTTGTAGTAGTAAATAGTGAGG
AATTGGCTGAAAAATTACATTTTATTCAAAACTCTACGGGGGGAGTATTAGGACCTTTTGATTCTTTCTTGTTAGTAAGG
GGAATAAAAACTTTGGCTGTAAGAATGGACAGACATAATGAAAACAGTAAAGTAATTTCAGAGTATTTGAGAAATAGGGA
AGAAGTAGAAAAAGTCTACTATCCTGGATTTGAAGATCATCCAGGTCATGATATTCAGAAGAAGCAGGCAAAGGGATATG
GTGGGGTAATATCCTTTGTATTAAATGATAAAATTGATTATAAGAAATTTTTGTCAAGCTTAGAGCTAATTACCTTTGGT
GAGAGCCTTGGTGGAGTGGAATCTTTGATATGTCATCCAGCTTCCATGACCCATGCAGCAATTCCATATGATATAAGACA
GGAAGTTGGAATTGTAGATAATTTAATAAGATTATCTGTTGGAATAGAAAATTCTCAGGATTTATTAGAAGATTTAACTG
CAGCCTTAAAAGAAAGCAGCATATAA

Protein sequence : 
MKIESLVIHGGIDGDDKTGAVNVPIYQTSTYKQPSFGHNTGYEYSRTGNPTREALEKLIADLEHGYAGFAFASGMAAITA
VISLFKTGDKVIISNNVYGGTFRVLDKVFNHFNIGYKIVDTTDLEAVKNNVDENVKAIYIETPTNPLMDITDIEGISKIA
KEKGIFTIVDNTFMTPYLQTPIDLGVDIVVHSATKYLGGHSDVVSGLVVVNSEELAEKLHFIQNSTGGVLGPFDSFLLVR
GIKTLAVRMDRHNENSKVISEYLRNREEVEKVYYPGFEDHPGHDIQKKQAKGYGGVISFVLNDKIDYKKFLSSLELITFG
ESLGGVESLICHPASMTHAAIPYDIRQEVGIVDNLIRLSVGIENSQDLLEDLTAALKESSI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 1e-94 54
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 2e-93 53
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 1e-72 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Clopa_4044 YP_007942461.1 cystathionine beta-lyase/cystathionine gamma-synthase BAC0207 Protein 2e-73 44