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Name : Clopa_3943 (Clopa_3943) Accession : YP_007942369.1 Strain : Clostridium pasteurianum BC1 Genome accession: NC_021182 Putative virulence/resistance : Unknown Product : glycosidase Function : - COG functional category : - COG ID : - EC number : - Position : 3974957 - 3976696 bp Length : 1740 bp Strand : - Note : PFAM: Alpha amylase, N-terminal ig-like domain; Alpha amylase, catalytic domain DNA sequence : ATGTTAAGAGAAGCAATATACCACAGGATTGATTTGGATTACTGCTATGCACTATCCAAGAACAAGTTCTTGGTTAAGCT GAGAACAAAACAGGATGACGTAGAAAAAGTAAATTTAATTTACATGGACAAATATAAATTTAATGAGGTTAAAAAGCGAT ATTATAAACCTATGAAAAAAATTGCCAGGGATGGTATGTTTGATTATTATGAGACTATTATTGATGTAGAAATGCTCAGT TTTTTTTACCTATTTGAATTAATAGACAATGATGAAAAAACATACTATAGCAATTATAAATTTTTTAATGAAAAGCCAGA TGGGGATAACAGTACCTTTGTAAAGCCTGCCAAAGCAGAAAAGGATATTTTTATTGTGCCAGAATGGGCTAGAAAAGCTA TCGTATATCAAATATTTCCCGAAAGATTCAATAATGGTGATAAGTCAAATGATCCTAGAAATATTCAAGATTGGTACAGT AAAGTAGATAGAGAAAGTATGCTTGGCGGGGACTTAGAGGGAATCATAAATAAATTAGATTATCTTCAGGAATTAGGCAT AAACACTATATATCTCACACCTATTTTTCAAGCTGGTTCCAATCATAAATATAATACTTTTGATTATTTCAAAGTTGATC CTCAATTTGGAACTATTGAAACTTTAAAAAAACTTGTTAGTAAGGCACATGAAAAGGGTATAAGAATTATTTTAGATGCT GTTTTTAATCATTGTGGAGTGGAGTTTTATGCTTTCAAAGACATATTAAAAAATGGGGAGAGATCCCAATATAAAGATTG GTTCGATATAAAAAGATTCCCTGTAGAGGTACGAGAAGATCCTGATTATGCCACCTTTGGGTATGTAGGAGTAATGCCAA AGCTTATGACAAAAAATCCAAAGGTTAAAGATTATCTCATAAGTATTGCAACCTATTGGATAAAGGAAGCAGATATAGAT GGTTGGAGACTGGATGTAGCAGATGAAATTGATCATAGTTTTTGGAGAGAATTTAGAAATGCGGTAAAAGCAGTAAAAAA AGATGCACTTATTATAGGTGAGATTTGGTATGATTCCAGTTCCTGGCTTCAAGGAGATCAGTTTGATTCTGTTATGAATT ATGAATTACAAAAGGCAGTTTCTGATTTTATAATTGAAGATAAATTTTCTCCTAAGGAATTTGAATACAGTATGGGATTT TTAAGAGTATTATATAAGTTACCAGCCTATAATGTGCTTTGGAATCTAATTGATAGTCATGACACACCTAGGTTTATTAA TAAAGCAAAAGGTGATAAATCAAAATTTAAACTTGCAGTCTTTATGCAGTTCACCTTGCCTGGGGCTCCTATGATTTATT ATGGGGATGAAGTTGGCATGACTGGTGGACAAGATCCTGATTGTAGAAGAGGTATGATTTGGGATGAAGAAAAACAGGAT AATGAATTACTACAGTATTATAAAAAGCTTATTAAAATTAGAAAGGATAATCTATCTTTAACTCTAGGGGAATTTTACAC TATATATACAAATGAAAATATTTATGGATTCAGAAGAGCTTATGAAGAAGAAATTCTAGATATATATATAAATAAGGGAA ACAGAGCGGAAACATTAAGTTTAAATGTAGAGGGTGAAGGAGTTTTAGATATTTTAAGTGGAGACAAGTATGAAACTGTG GATGGAAAGATAAATTTAATTATTTCAGAAAAAAGTGGAATTATATTAAAAAATATGTGA Protein sequence : MLREAIYHRIDLDYCYALSKNKFLVKLRTKQDDVEKVNLIYMDKYKFNEVKKRYYKPMKKIARDGMFDYYETIIDVEMLS FFYLFELIDNDEKTYYSNYKFFNEKPDGDNSTFVKPAKAEKDIFIVPEWARKAIVYQIFPERFNNGDKSNDPRNIQDWYS KVDRESMLGGDLEGIINKLDYLQELGINTIYLTPIFQAGSNHKYNTFDYFKVDPQFGTIETLKKLVSKAHEKGIRIILDA VFNHCGVEFYAFKDILKNGERSQYKDWFDIKRFPVEVREDPDYATFGYVGVMPKLMTKNPKVKDYLISIATYWIKEADID GWRLDVADEIDHSFWREFRNAVKAVKKDALIIGEIWYDSSSWLQGDQFDSVMNYELQKAVSDFIIEDKFSPKEFEYSMGF LRVLYKLPAYNVLWNLIDSHDTPRFINKAKGDKSKFKLAVFMQFTLPGAPMIYYGDEVGMTGGQDPDCRRGMIWDEEKQD NELLQYYKKLIKIRKDNLSLTLGEFYTIYTNENIYGFRRAYEEEILDIYINKGNRAETLSLNVEGEGVLDILSGDKYETV DGKINLIISEKSGIILKNM |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SPN23F_09660 | YP_002510949.1 | alpha-amylase | Not tested | PPI-1 | Protein | 2e-98 | 42 |
